RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 SAMD7Q7Z3H4 446 aa15.42■□□□□ 0.06
LRRC28-206ENST00000558471 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
LRRC28-206ENST00000558471 MYO3BQ8WXR4 1341 aa15.42■□□□□ 0.06
LRRC28-206ENST00000558471 ADAMTSL1Q8N6G6 1762 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 FRAT2O75474 233 aaPredicted RBP15.41■□□□□ 0.06
LRRC28-206ENST00000558471 EGFRP00533 1210 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 PHKA1P46020 1223 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 HIRAP54198 1017 aaPredicted RBP15.41■□□□□ 0.06
LRRC28-206ENST00000558471 ZNF280AP59817 542 aaPredicted RBP15.41■□□□□ 0.06
LRRC28-206ENST00000558471 C1QTNF8P60827 252 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 TNNI3KQ59H18 835 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 RBM26Q5T8P6 1007 aaKnown RBP15.41■□□□□ 0.06
LRRC28-206ENST00000558471 CCDC102BQ68D86 513 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 EXOC6Q8TAG9 804 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 FPGT-TNNI3KV9GXZ4 949 aa15.41■□□□□ 0.06
LRRC28-206ENST00000558471 POLR2AP24928 1970 aaKnown RBP15.4■□□□□ 0.06
LRRC28-206ENST00000558471 FKBP1AP62942 108 aaKnown RBP15.4■□□□□ 0.06
LRRC28-206ENST00000558471 CHAF1AQ13111 956 aaPredicted RBP15.4■□□□□ 0.06
LRRC28-206ENST00000558471 TBC1D10BQ4KMP7 808 aaPredicted RBP15.4■□□□□ 0.06
LRRC28-206ENST00000558471 LDHDQ86WU2 507 aa15.4■□□□□ 0.06
LRRC28-206ENST00000558471 KIAA0825Q8IV33 1275 aa15.4■□□□□ 0.06
LRRC28-206ENST00000558471 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
LRRC28-206ENST00000558471 TRPM4Q8TD43 1214 aa15.4■□□□□ 0.06
LRRC28-206ENST00000558471 EAF2Q96CJ1 260 aaPredicted RBP15.4■□□□□ 0.06
LRRC28-206ENST00000558471 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
LRRC28-206ENST00000558471 APBB1O00213 710 aa15.39■□□□□ 0.05
LRRC28-206ENST00000558471 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-206ENST00000558471 MFSD14BQ5SR56 506 aa15.39■□□□□ 0.05
LRRC28-206ENST00000558471 CHADLQ6NUI6 762 aa15.39■□□□□ 0.05
LRRC28-206ENST00000558471 SMC1BQ8NDV3 1235 aa15.39■□□□□ 0.05
LRRC28-206ENST00000558471 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
LRRC28-206ENST00000558471 GNL3LQ9NVN8 582 aaKnown RBP15.39■□□□□ 0.05
LRRC28-206ENST00000558471 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
LRRC28-206ENST00000558471 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 FSTL1Q12841 308 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 GRIK5Q16478 980 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 OGFOD1Q8N543 542 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 KIF1BPQ96EK5 621 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 DBNDD2Q9BQY9 259 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
LRRC28-206ENST00000558471 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 MYOZ2Q9NPC6 264 aa15.38■□□□□ 0.05
LRRC28-206ENST00000558471 SEMA3EO15041 775 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 ZBTB22O15209 634 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 AAMPQ13685 434 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 KIF4BQ2VIQ3 1234 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 MAP1SQ66K74 1059 aaPredicted RBP15.37■□□□□ 0.05
LRRC28-206ENST00000558471 TBC1D22AQ8WUA7 517 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 PGAP2Q9UHJ9 254 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 DBNLQ9UJU6 430 aaKnown RBP15.37■□□□□ 0.05
LRRC28-206ENST00000558471 DENND2AQ9ULE3 1009 aa15.37■□□□□ 0.05
LRRC28-206ENST00000558471 COL1A1P02452 1464 aaPredicted RBP15.37■□□□□ 0.05
LRRC28-206ENST00000558471 MMP14P50281 582 aa15.36■□□□□ 0.05
LRRC28-206ENST00000558471 RASGRF1Q13972 1273 aa15.36■□□□□ 0.05
LRRC28-206ENST00000558471 AACSQ86V21 672 aa15.36■□□□□ 0.05
LRRC28-206ENST00000558471 WDR66Q8TBY9 1149 aa15.36■□□□□ 0.05
LRRC28-206ENST00000558471 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
LRRC28-206ENST00000558471 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
LRRC28-206ENST00000558471 HDAC9Q9UKV0 1011 aa15.36■□□□□ 0.05
LRRC28-206ENST00000558471 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
LRRC28-206ENST00000558471 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
LRRC28-206ENST00000558471 SCARF1Q14162 830 aa15.35■□□□□ 0.05
LRRC28-206ENST00000558471 CCDC158Q5M9N0 1113 aa15.35■□□□□ 0.05
LRRC28-206ENST00000558471 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
LRRC28-206ENST00000558471 CLASRPQ8N2M8 674 aaKnown RBP15.35■□□□□ 0.05
LRRC28-206ENST00000558471 BCL11AQ9H165 835 aa15.35■□□□□ 0.05
LRRC28-206ENST00000558471 TTF2Q9UNY4 1162 aaKnown RBP15.35■□□□□ 0.05
LRRC28-206ENST00000558471 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
LRRC28-206ENST00000558471 SMARCA5O60264 1052 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-206ENST00000558471 ITGBL1O95965 494 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-206ENST00000558471 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
LRRC28-206ENST00000558471 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
LRRC28-206ENST00000558471 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
LRRC28-206ENST00000558471 HMG20BQ9P0W2 317 aa15.34■□□□□ 0.05
LRRC28-206ENST00000558471 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
LRRC28-206ENST00000558471 WNT10BO00744 389 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 MCAMP43121 646 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 SPATA5Q8NB90 893 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 ZBED3Q96IU2 234 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-206ENST00000558471 SUGT1Q9Y2Z0 365 aa15.33■□□□□ 0.04
LRRC28-206ENST00000558471 PDS5AQ29RF7 1337 aaKnown RBP15.33■□□□□ 0.04
LRRC28-206ENST00000558471 IFIT2P09913 472 aaKnown RBP15.32■□□□□ 0.04
LRRC28-206ENST00000558471 HDAC1Q13547 482 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-206ENST00000558471 DLGAP5Q15398 846 aa15.32■□□□□ 0.04
LRRC28-206ENST00000558471 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
LRRC28-206ENST00000558471 MTMR14Q8NCE2 650 aa15.32■□□□□ 0.04
LRRC28-206ENST00000558471 ZNF512BQ96KM6 892 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-206ENST00000558471 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-206ENST00000558471 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
LRRC28-206ENST00000558471 SALL1Q9NSC2 1324 aa15.32■□□□□ 0.04
LRRC28-206ENST00000558471 PRDX5P30044 214 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 CRKP46108 304 aa15.31■□□□□ 0.04
LRRC28-206ENST00000558471 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 HDLBPQ00341 1268 aaKnown RBP15.31■□□□□ 0.04
LRRC28-206ENST00000558471 FMR1Q06787 632 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms