RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 SIX5Q8N196 739 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 LARGE2Q8N3Y3 721 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 USP35Q9P2H5 1018 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 TOPAZ1Q8N9V7 1692 aa8.81□□□□□ -1
ZEB1-211ENST00000558440 PARP4Q9UKK3 1724 aaKnown RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 UTRNP46939 3433 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 PHF20L1A8MW92 1017 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 M0R2N6 131 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 NOS2P35228 1153 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 EVA1CP58658 441 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 TBCELQ5QJ74 424 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 PODNQ7Z5L7 613 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 L3MBTL2Q969R5 705 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 PPP1R1BQ9UD71 204 aaPredicted RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 MAFBQ9Y5Q3 323 aaPredicted RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 RGPD3A6NKT7 1758 aaPredicted RBP8.8□□□□□ -1
ZEB1-211ENST00000558440 RGPD4Q7Z3J3 1758 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 CNTNAP5Q8WYK1 1306 aa8.8□□□□□ -1
ZEB1-211ENST00000558440 NRKQ7Z2Y5 1582 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 SHISA8B8ZZ34 492 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 FAM157BP0CG42 384 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 MAPTP10636 758 aaKnown RBP8.79□□□□□ -1
ZEB1-211ENST00000558440 TNP2Q05952 138 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 XP32Q5T750 250 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 BEND7Q8N7W2 519 aaPredicted RBP8.79□□□□□ -1
ZEB1-211ENST00000558440 GALNT6Q8NCL4 622 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 TFIP11Q9UBB9 837 aaKnown RBP8.79□□□□□ -1
ZEB1-211ENST00000558440 HCN2Q9UL51 889 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 SSH2Q76I76 1423 aa8.79□□□□□ -1
ZEB1-211ENST00000558440 AKAP12Q02952 1782 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 LMO7Q8WWI1 1683 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 CHD4Q14839 1912 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 KAT6BQ8WYB5 2073 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 EML1O00423 815 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 DKK1O94907 266 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 BICDL1Q6ZP65 573 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 SLCO4C1Q6ZQN7 724 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
ZEB1-211ENST00000558440 GJA3Q9Y6H8 435 aa8.78□□□□□ -1
ZEB1-211ENST00000558440 WNK3Q9BYP7 1800 aa8.77□□□□□ -1
ZEB1-211ENST00000558440 SERTM1A2A2V5 107 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 KHNYNO15037 678 aaKnown RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 ARAFP10398 606 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 PSMA6P60900 246 aaKnown RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 CALR3Q96L12 384 aaKnown RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 TSPAN10Q9H1Z9 355 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 SPON1Q9HCB6 807 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 GGA1Q9UJY5 639 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 ZNF232Q9UNY5 417 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 GPC6Q9Y625 555 aaPredicted RBP8.77□□□□□ -1.01
ZEB1-211ENST00000558440 CAMTA1Q9Y6Y1 1673 aa8.77□□□□□ -1.01
ZEB1-211ENST00000558440 NINLQ9Y2I6 1382 aa8.76□□□□□ -1.01
ZEB1-211ENST00000558440 CD33P20138 364 aa8.76□□□□□ -1.01
ZEB1-211ENST00000558440 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
ZEB1-211ENST00000558440 LARP1Q6PKG0 1096 aaKnown RBP8.76□□□□□ -1.01
ZEB1-211ENST00000558440 POLR3AO14802 1390 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-211ENST00000558440 PEAK1Q9H792 1746 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 KIAA1210Q9ULL0 1709 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 SFI1A8K8P3 1242 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 EFSO43281 561 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 KCNQ2O43526 872 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 RASA1P20936 1047 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 HIRAP54198 1017 aaPredicted RBP8.75□□□□□ -1.01
ZEB1-211ENST00000558440 ABTB2Q8N961 1025 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
ZEB1-211ENST00000558440 C7orf43Q8WVR3 580 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 CDK19Q9BWU1 502 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 PPP1R12CQ9BZL4 782 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
ZEB1-211ENST00000558440 CASZ1Q86V15 1759 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 LRRC37A3O60309 1634 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 ACEP12821 1306 aa8.75□□□□□ -1.01
ZEB1-211ENST00000558440 CPDO75976 1380 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 OVOS2A0A0G2JMS6 1433 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 OVOS2A0A0J9YW53 1432 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 OVOS2Q6IE36 1432 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 MSTNO14793 375 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 SNRPNP63162 240 aaKnown RBP8.74□□□□□ -1.01
ZEB1-211ENST00000558440 LAMC2Q13753 1193 aa8.74□□□□□ -1.01
ZEB1-211ENST00000558440 AVENQ9NQS1 362 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-211ENST00000558440 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
ZEB1-211ENST00000558440 RAB3GAP2Q9H2M9 1393 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 COL5A2P05997 1499 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-211ENST00000558440 ADAM23O75077 832 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 EPXP11678 715 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 NLRP13Q86W25 1043 aa8.73□□□□□ -1.01
ZEB1-211ENST00000558440 CHMP3Q9Y3E7 222 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms