RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PUM3Q15397 648 aaKnown RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 DACT2Q5SW24 774 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 MAP1SQ66K74 1059 aaPredicted RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 CDC37L1Q7L3B6 337 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 LPIN2Q92539 896 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 FAM84BQ96KN1 310 aaPredicted RBP10.54□□□□□ -0.72
TPM1-213ENST00000558400 HDAC9Q9UKV0 1011 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 ADAMTSL1Q8N6G6 1762 aa10.54□□□□□ -0.72
TPM1-213ENST00000558400 HIRAP54198 1017 aaPredicted RBP10.53□□□□□ -0.72
TPM1-213ENST00000558400 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 TDRD7Q8NHU6 1098 aaKnown RBP10.53□□□□□ -0.72
TPM1-213ENST00000558400 KLHDC4Q8TBB5 520 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 DCPSQ96C86 337 aaKnown RBP10.53□□□□□ -0.72
TPM1-213ENST00000558400 AKAP2Q9Y2D5 859 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 LTBP1Q14766 1721 aa10.53□□□□□ -0.72
TPM1-213ENST00000558400 ZNF609O15014 1411 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 TMEM88BA6NKF7 163 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 FRAT2O75474 233 aaPredicted RBP10.52□□□□□ -0.73
TPM1-213ENST00000558400 SLC5A1P13866 664 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 KLRK1P26718 216 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 ATP8B2P98198 1209 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM1-213ENST00000558400 PDE3AQ14432 1141 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 RBM26Q5T8P6 1007 aaKnown RBP10.52□□□□□ -0.73
TPM1-213ENST00000558400 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 ATG9AQ7Z3C6 839 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 GNL3LQ9NVN8 582 aaKnown RBP10.52□□□□□ -0.73
TPM1-213ENST00000558400 DDX19BQ9UMR2 479 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 TNNQ9UQP3 1299 aa10.52□□□□□ -0.73
TPM1-213ENST00000558400 TNRC18O15417 2968 aaPredicted RBP10.52□□□□□ -0.73
TPM1-213ENST00000558400 RLBP1P12271 317 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 FGFR2P21802 821 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 GYG1P46976 350 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 MAP2K1Q02750 393 aaPredicted RBP10.51□□□□□ -0.73
TPM1-213ENST00000558400 KIF4BQ2VIQ3 1234 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 TBC1D10BQ4KMP7 808 aaPredicted RBP10.51□□□□□ -0.73
TPM1-213ENST00000558400 TRPM4Q8TD43 1214 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 TBC1D22AQ8WUA7 517 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 SIL1Q9H173 461 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 MYOZ2Q9NPC6 264 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 CASP8AP2Q9UKL3 1982 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 FAM205AQ6ZU69 1335 aa10.51□□□□□ -0.73
TPM1-213ENST00000558400 SCARF1Q14162 830 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 ATP2B3Q16720 1220 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 SULF1Q8IWU6 871 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 PANK1Q8TE04 598 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 SSH3Q8TE77 659 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 PA2G4Q9UQ80 394 aaKnown RBP10.5□□□□□ -0.73
TPM1-213ENST00000558400 SUGT1Q9Y2Z0 365 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 TRPM7Q96QT4 1865 aa10.5□□□□□ -0.73
TPM1-213ENST00000558400 SHTN1A0MZ66 631 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 RASSF10A6NK89 507 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 BCAMP50895 628 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 MVPQ14764 893 aaKnown RBP10.49□□□□□ -0.73
TPM1-213ENST00000558400 MFSD14BQ5SR56 506 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 KRT26Q7Z3Y9 468 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 KIAA0825Q8IV33 1275 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 RPAP2Q8IXW5 612 aaPredicted RBP10.49□□□□□ -0.73
TPM1-213ENST00000558400 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 WDR66Q8TBY9 1149 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 MRIQ9BWK5 157 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 PITPNM2Q9BZ72 1349 aa10.49□□□□□ -0.73
TPM1-213ENST00000558400 PNMA6EA0A0J9YXQ4 647 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 WNT10BO00744 389 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 SEMA3EO15041 775 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 MYO1BO43795 1136 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 HDLBPQ00341 1268 aaKnown RBP10.48□□□□□ -0.73
TPM1-213ENST00000558400 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 USP48Q86UV5 1035 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 MXD3Q9BW11 206 aa10.48□□□□□ -0.73
TPM1-213ENST00000558400 HMMRO75330 724 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
TPM1-213ENST00000558400 EGFRP00533 1210 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 TIMM10P62072 90 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 TFCP2Q12800 502 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 OS9Q13438 667 aaPredicted RBP10.47□□□□□ -0.73
TPM1-213ENST00000558400 DEFB115Q30KQ5 88 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 GLIS2Q9BZE0 524 aaPredicted RBP10.47□□□□□ -0.73
TPM1-213ENST00000558400 GPR108Q9NPR9 543 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 ZBTB40Q9NUA8 1239 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 SERPINA10Q9UK55 444 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 DENND2AQ9ULE3 1009 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
TPM1-213ENST00000558400 NOP58Q9Y2X3 529 aaKnown RBP10.47□□□□□ -0.73
TPM1-213ENST00000558400 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
TPM1-213ENST00000558400 A0A1B0GUL7 405 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 TRAF5O00463 557 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 CELF2O95319 508 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 RBM5P52756 815 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM1-213ENST00000558400 NBPF9Q3BBW0 867 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 GORABQ5T7V8 394 aa10.46□□□□□ -0.73
TPM1-213ENST00000558400 ANGEL2Q5VTE6 544 aaKnown RBP10.46□□□□□ -0.73
TPM1-213ENST00000558400 CST9Q5W186 159 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms