RNA–Protein interactions for RNA: ENST00000558294.1

SHF-203, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2

Gene SHF, Length 604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-203ENST00000558294 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 HELBQ8NG08 1087 aaPredicted RBP13.61□□□□□ -0.23
SHF-203ENST00000558294 DEFB129Q9H1M3 183 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 R3HDMLQ9H3Y0 253 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 PCDHAC2Q9Y5I4 1007 aa13.61□□□□□ -0.23
SHF-203ENST00000558294 ANP32CO43423 234 aa13.6□□□□□ -0.23
SHF-203ENST00000558294 FKTNO75072 461 aa13.6□□□□□ -0.23
SHF-203ENST00000558294 IL1R1P14778 569 aa13.6□□□□□ -0.23
SHF-203ENST00000558294 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
SHF-203ENST00000558294 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
SHF-203ENST00000558294 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
SHF-203ENST00000558294 F6X3S4 739 aa13.59□□□□□ -0.23
SHF-203ENST00000558294 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
SHF-203ENST00000558294 CFAP100Q494V2 611 aa13.59□□□□□ -0.23
SHF-203ENST00000558294 FBXO46Q6PJ61 603 aaPredicted RBP13.59□□□□□ -0.23
SHF-203ENST00000558294 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
SHF-203ENST00000558294 CHMP3Q9Y3E7 222 aa13.59□□□□□ -0.23
SHF-203ENST00000558294 CLRN2A0PK11 232 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 SPDYE2BA6NHP3 402 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 MANSC4A6NHS7 340 aaPredicted RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 F8W031 263 aaPredicted RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 ALDH1A1P00352 501 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 SPDYE6P0CI01 402 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 ZBTB48P10074 688 aaPredicted RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 EXOSC9Q06265 439 aaKnown RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 PRPF38BQ5VTL8 546 aaKnown RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 IFNL1Q8IU54 200 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 PRMT6Q96LA8 375 aaPredicted RBP13.58□□□□□ -0.24
SHF-203ENST00000558294 AOX1Q06278 1338 aa13.58□□□□□ -0.24
SHF-203ENST00000558294 UNCXA6NJT0 531 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 MYO1BO43795 1136 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 PPP1R12BO60237 982 aaPredicted RBP13.57□□□□□ -0.24
SHF-203ENST00000558294 INHBEP58166 350 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 WNK4Q96J92 1243 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 ZNF594Q96JF6 807 aaPredicted RBP13.57□□□□□ -0.24
SHF-203ENST00000558294 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
SHF-203ENST00000558294 GRM8O00222 908 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
SHF-203ENST00000558294 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 SUPT20HL1Q3ZLR7 823 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 NBPF12Q5TAG4 269 aaPredicted RBP13.56□□□□□ -0.24
SHF-203ENST00000558294 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 VEZTQ9HBM0 779 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 ARAP2Q8WZ64 1704 aa13.56□□□□□ -0.24
SHF-203ENST00000558294 OTOFQ9HC10 1997 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 PLIN1O60240 522 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 GJA5P36382 358 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
SHF-203ENST00000558294 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.55□□□□□ -0.24
SHF-203ENST00000558294 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
SHF-203ENST00000558294 HTTP42858 3142 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 FAM205AQ6ZU69 1335 aa13.55□□□□□ -0.24
SHF-203ENST00000558294 USP2O75604 605 aaPredicted RBP13.54□□□□□ -0.24
SHF-203ENST00000558294 IREB2P48200 963 aaKnown RBP13.54□□□□□ -0.24
SHF-203ENST00000558294 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHF-203ENST00000558294 RASA3Q14644 834 aa13.54□□□□□ -0.24
SHF-203ENST00000558294 TAF7LQ5H9L4 462 aa13.54□□□□□ -0.24
SHF-203ENST00000558294 OTOP1Q7RTM1 612 aa13.54□□□□□ -0.24
SHF-203ENST00000558294 CNNM1Q9NRU3 951 aa13.54□□□□□ -0.24
SHF-203ENST00000558294 ALDH1L1O75891 902 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 UBE4AQ14139 1066 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 ANKRD13AQ8IZ07 590 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
SHF-203ENST00000558294 C9orf78Q9NZ63 289 aaPredicted RBP13.53□□□□□ -0.24
SHF-203ENST00000558294 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 TRIM17Q9Y577 477 aa13.53□□□□□ -0.24
SHF-203ENST00000558294 TESPA1A2RU30 521 aaPredicted RBP13.52□□□□□ -0.25
SHF-203ENST00000558294 GYG1P46976 350 aa13.52□□□□□ -0.25
SHF-203ENST00000558294 CRHR2Q13324 411 aa13.52□□□□□ -0.25
SHF-203ENST00000558294 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
SHF-203ENST00000558294 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
SHF-203ENST00000558294 FAM84BQ96KN1 310 aaPredicted RBP13.52□□□□□ -0.25
SHF-203ENST00000558294 PTPN18Q99952 460 aa13.52□□□□□ -0.25
SHF-203ENST00000558294 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.25
SHF-203ENST00000558294 TTF2Q9UNY4 1162 aaKnown RBP13.52□□□□□ -0.25
SHF-203ENST00000558294 HIBADHP31937 336 aaKnown RBP13.51□□□□□ -0.25
SHF-203ENST00000558294 CDAN1Q8IWY9 1227 aa13.51□□□□□ -0.25
SHF-203ENST00000558294 CD99L2Q8TCZ2 262 aa13.51□□□□□ -0.25
SHF-203ENST00000558294 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
SHF-203ENST00000558294 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
SHF-203ENST00000558294 TEPSINQ96N21 525 aa13.51□□□□□ -0.25
SHF-203ENST00000558294 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
SHF-203ENST00000558294 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
SHF-203ENST00000558294 RBBP6Q7Z6E9 1792 aaKnown RBP13.5□□□□□ -0.25
SHF-203ENST00000558294 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
SHF-203ENST00000558294 OTUD7BQ6GQQ9 843 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 SLC4A10Q6U841 1118 aa13.5□□□□□ -0.25
SHF-203ENST00000558294 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
SHF-203ENST00000558294 OPTNQ96CV9 577 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms