RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 NAIPQ13075 1403 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 IFIT3O14879 490 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 MUM1Q2TAK8 710 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 USP26Q9BXU7 913 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 IBTKQ9P2D0 1353 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 SMIM24O75264 130 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 SEC24BO95487 1268 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 TACO1Q9BSH4 297 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
CSPG4P12-201ENST00000558282 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 ZNF76P36508 570 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 MAGEA9P43362 315 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 UBXN1Q04323 297 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 ZMAT2Q96NC0 199 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 NBPF7P0C2Y1 421 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 PPP1R2P41236 205 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 CCDC62Q6P9F0 684 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 TSC1Q92574 1164 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 NLRP6P59044 892 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 PSME1Q06323 249 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 ETF1P62495 437 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 GKAP1Q5VSY0 366 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 CATIPQ7Z7H3 387 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 RABGGTAQ92696 567 aa13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-201ENST00000558282 EVA1CP58658 441 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 FANCCQ00597 558 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 THEGQ9P2T0 379 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 TPD52P55327 224 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 CLUL1Q15846 466 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 TMEM132EQ6IEE7 984 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 SND1Q7KZF4 910 aaKnown RBP eCLIP13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 IGSF22Q8N9C0 903 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 BCAP29Q9UHQ4 241 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 HDAC9Q9UKV0 1011 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 CCDC141Q6ZP82 1450 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 RNF40O75150 1001 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 PPP1R7Q15435 360 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 TERF2Q15554 542 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 RASIP1Q5U651 963 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
CSPG4P12-201ENST00000558282 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 AK2P54819 239 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 MAP3K21Q5TCX8 1036 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 HSP90AA4PQ58FG1 418 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 MMRN2Q9H8L6 949 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 PPFIA2O75334 1257 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 STAT6P42226 847 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 AFMP43652 599 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 TNIP1Q15025 636 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 NUTM2GQ5VZR2 741 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 VPS52Q8N1B4 723 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
CSPG4P12-201ENST00000558282 UGGT2Q9NYU1 1516 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 CYB5RLQ6IPT4 315 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 TRPC3Q13507 836 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 SPTY2D1Q68D10 685 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 TMEM63CQ9P1W3 806 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 NSD2O96028 1365 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 MRFAP1L1Q96HT8 127 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 TMEM67Q5HYA8 995 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 Q9H521 79 aa13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 ACTR5Q9H9F9 607 aaPredicted RBP13.22□□□□□ -0.29
CSPG4P12-201ENST00000558282 MYO1CO00159 1063 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 FAF1Q9UNN5 650 aaPredicted RBP13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 STMN1P16949 149 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 MAP3K12Q12852 859 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 CCDC170Q8IYT3 715 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 SECISBP2LQ93073 1101 aaKnown RBP13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
CSPG4P12-201ENST00000558282 KLF18A0A0U1RQI7 1052 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 DNAJC8O75937 253 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 HNRNPH2P55795 449 aaKnown RBP13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 APBB1IPQ7Z5R6 666 aaPredicted RBP13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.3
CSPG4P12-201ENST00000558282 CCDC8Q9H0W5 538 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms