RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
ALPK3-202ENST00000558077 SRGAP3O43295 1099 aa16.92■□□□□ 0.3
ALPK3-202ENST00000558077 BCAMP50895 628 aa16.92■□□□□ 0.3
ALPK3-202ENST00000558077 PUM3Q15397 648 aaKnown RBP16.92■□□□□ 0.3
ALPK3-202ENST00000558077 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
ALPK3-202ENST00000558077 KIAA0825Q8IV33 1275 aa16.92■□□□□ 0.3
ALPK3-202ENST00000558077 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
ALPK3-202ENST00000558077 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
ALPK3-202ENST00000558077 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
ALPK3-202ENST00000558077 MKRN1Q9UHC7 482 aaKnown RBP16.91■□□□□ 0.3
ALPK3-202ENST00000558077 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
ALPK3-202ENST00000558077 PCDHAC2Q9Y5I4 1007 aa16.91■□□□□ 0.3
ALPK3-202ENST00000558077 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 WNT10BO00744 389 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 MMP14P50281 582 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 POLA2Q14181 598 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 GRIK5Q16478 980 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
ALPK3-202ENST00000558077 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 LPIN2Q92539 896 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
ALPK3-202ENST00000558077 AOX1Q06278 1338 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 ARAP2Q8WZ64 1704 aa16.9■□□□□ 0.3
ALPK3-202ENST00000558077 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
ALPK3-202ENST00000558077 FTSJ3Q8IY81 847 aaKnown RBP16.89■□□□□ 0.29
ALPK3-202ENST00000558077 DCPSQ96C86 337 aaKnown RBP16.89■□□□□ 0.29
ALPK3-202ENST00000558077 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
ALPK3-202ENST00000558077 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
ALPK3-202ENST00000558077 CELF2O95319 508 aaKnown RBP16.88■□□□□ 0.29
ALPK3-202ENST00000558077 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
ALPK3-202ENST00000558077 VEGFBP49765 207 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 ITPRIPQ8IWB1 547 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 MTMR14Q8NCE2 650 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 SCAF8Q9UPN6 1271 aaKnown RBP16.88■□□□□ 0.29
ALPK3-202ENST00000558077 TLL2Q9Y6L7 1015 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
ALPK3-202ENST00000558077 COL1A1P02452 1464 aaPredicted RBP16.87■□□□□ 0.29
ALPK3-202ENST00000558077 SLC5A1P13866 664 aa16.87■□□□□ 0.29
ALPK3-202ENST00000558077 ADORA1P30542 326 aa16.87■□□□□ 0.29
ALPK3-202ENST00000558077 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
ALPK3-202ENST00000558077 CAVIN4Q5BKX8 364 aa16.87■□□□□ 0.29
ALPK3-202ENST00000558077 MFSD14BQ5SR56 506 aa16.87■□□□□ 0.29
ALPK3-202ENST00000558077 ECM29Q5VYK3 1845 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 MYH13Q9UKX3 1938 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 F8W031 263 aaPredicted RBP16.86■□□□□ 0.29
ALPK3-202ENST00000558077 ZBTB22O15209 634 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 TIMM10P62072 90 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 TFCP2Q12800 502 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 SAPCD2Q86UD0 394 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 HDAC9Q9UKV0 1011 aa16.86■□□□□ 0.29
ALPK3-202ENST00000558077 HSPA1AP0DMV8 641 aaKnown RBP16.85■□□□□ 0.29
ALPK3-202ENST00000558077 HSPA1BP0DMV9 641 aaKnown RBP16.85■□□□□ 0.29
ALPK3-202ENST00000558077 SULF1Q8IWU6 871 aa16.85■□□□□ 0.29
ALPK3-202ENST00000558077 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
ALPK3-202ENST00000558077 PRMT6Q96LA8 375 aaPredicted RBP16.85■□□□□ 0.29
ALPK3-202ENST00000558077 SPDYE2BA6NHP3 402 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 SPDYE6P0CI01 402 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 PHKA1P46020 1223 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
ALPK3-202ENST00000558077 MVPQ14764 893 aaKnown RBP16.84■□□□□ 0.29
ALPK3-202ENST00000558077 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 C20orf194Q5TEA3 1177 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 CEP85Q6P2H3 762 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
ALPK3-202ENST00000558077 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
ALPK3-202ENST00000558077 A0A1B0GUL7 405 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 MS4A1P11836 297 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 DLGAP5Q15398 846 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 PRAMEF18Q5VWM3 479 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 ZBTB40Q9NUA8 1239 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
ALPK3-202ENST00000558077 COG6Q9Y2V7 657 aa16.83■□□□□ 0.28
ALPK3-202ENST00000558077 NOP58Q9Y2X3 529 aaKnown RBP16.83■□□□□ 0.28
ALPK3-202ENST00000558077 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
ALPK3-202ENST00000558077 CCDC102BQ68D86 513 aa16.82■□□□□ 0.28
ALPK3-202ENST00000558077 CYP4F22Q6NT55 531 aa16.82■□□□□ 0.28
ALPK3-202ENST00000558077 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
ALPK3-202ENST00000558077 HHIPL1Q96JK4 782 aa16.82■□□□□ 0.28
ALPK3-202ENST00000558077 GBA2Q9HCG7 927 aaPredicted RBP16.82■□□□□ 0.28
ALPK3-202ENST00000558077 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
ALPK3-202ENST00000558077 XAGE2Q96GT9 111 aa16.81■□□□□ 0.28
ALPK3-202ENST00000558077 CAPNS2Q96L46 248 aa16.81■□□□□ 0.28
ALPK3-202ENST00000558077 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
ALPK3-202ENST00000558077 CRKP46108 304 aa16.8■□□□□ 0.28
ALPK3-202ENST00000558077 HDLBPQ00341 1268 aaKnown RBP16.8■□□□□ 0.28
ALPK3-202ENST00000558077 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
ALPK3-202ENST00000558077 PDE3AQ14432 1141 aa16.8■□□□□ 0.28
ALPK3-202ENST00000558077 SIRT2Q8IXJ6 389 aa16.8■□□□□ 0.28
ALPK3-202ENST00000558077 MRIQ9BWK5 157 aa16.8■□□□□ 0.28
ALPK3-202ENST00000558077 AKAP2Q9Y2D5 859 aa16.8■□□□□ 0.28
ALPK3-202ENST00000558077 CLRN2A0PK11 232 aa16.79■□□□□ 0.28
ALPK3-202ENST00000558077 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
ALPK3-202ENST00000558077 SURF6O75683 361 aaKnown RBP16.79■□□□□ 0.28
ALPK3-202ENST00000558077 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
ALPK3-202ENST00000558077 DDX19BQ9UMR2 479 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms