RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SCN9AQ15858 1988 aa15.05■□□□□ -0
TPM1-209ENST00000558072 MYH13Q9UKX3 1938 aa15.04■□□□□ -0
TPM1-209ENST00000558072 RFX7Q2KHR2 1363 aa15.04■□□□□ -0
TPM1-209ENST00000558072 ZFYP08048 801 aaPredicted RBP15.04■□□□□ -0
TPM1-209ENST00000558072 PHKA1P46020 1223 aa15.04■□□□□ -0
TPM1-209ENST00000558072 BCAMP50895 628 aa15.04■□□□□ -0
TPM1-209ENST00000558072 SPTY2D1Q68D10 685 aaPredicted RBP15.04■□□□□ -0
TPM1-209ENST00000558072 PODNQ7Z5L7 613 aa15.04■□□□□ -0
TPM1-209ENST00000558072 SPATA5Q8NB90 893 aa15.04■□□□□ -0
TPM1-209ENST00000558072 WDR66Q8TBY9 1149 aa15.04■□□□□ -0
TPM1-209ENST00000558072 TBC1D22AQ8WUA7 517 aa15.04■□□□□ -0
TPM1-209ENST00000558072 RUFY2Q8WXA3 655 aa15.04■□□□□ -0
TPM1-209ENST00000558072 RILPL2Q969X0 211 aa15.04■□□□□ -0
TPM1-209ENST00000558072 TAOK3Q9H2K8 898 aa15.04■□□□□ -0
TPM1-209ENST00000558072 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
TPM1-209ENST00000558072 PAG1Q9NWQ8 432 aa15.04■□□□□ -0
TPM1-209ENST00000558072 NDUFB9Q9Y6M9 179 aa15.04■□□□□ -0
TPM1-209ENST00000558072 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
TPM1-209ENST00000558072 PPIP5K2O43314 1243 aa15.03■□□□□ -0
TPM1-209ENST00000558072 CDC45O75419 566 aa15.03■□□□□ -0
TPM1-209ENST00000558072 IL1R1P14778 569 aa15.03■□□□□ -0
TPM1-209ENST00000558072 SDSP20132 328 aa15.03■□□□□ -0
TPM1-209ENST00000558072 PI16Q6UXB8 463 aa15.03■□□□□ -0
TPM1-209ENST00000558072 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
TPM1-209ENST00000558072 KIAA2012Q0VF49 1180 aa15.02■□□□□ -0
TPM1-209ENST00000558072 SCARF1Q14162 830 aa15.02■□□□□ -0
TPM1-209ENST00000558072 TDRD7Q8NHU6 1098 aaKnown RBP15.02■□□□□ -0
TPM1-209ENST00000558072 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
TPM1-209ENST00000558072 CD209Q9NNX6 404 aa15.02■□□□□ -0
TPM1-209ENST00000558072 ADAMTSL1Q8N6G6 1762 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 GSPT1P15170 499 aaKnown RBP15.01□□□□□ -0.01
TPM1-209ENST00000558072 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
TPM1-209ENST00000558072 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 KBTBD3Q8NAB2 608 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 FSD1Q9BTV5 496 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 MXD3Q9BW11 206 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 SUGT1Q9Y2Z0 365 aa15.01□□□□□ -0.01
TPM1-209ENST00000558072 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
TPM1-209ENST00000558072 SALL1Q9NSC2 1324 aa15□□□□□ -0.01
TPM1-209ENST00000558072 ECE2O60344 883 aa15□□□□□ -0.01
TPM1-209ENST00000558072 MCAMP43121 646 aa15□□□□□ -0.01
TPM1-209ENST00000558072 MFAP1P55081 439 aaKnown RBP15□□□□□ -0.01
TPM1-209ENST00000558072 RASGRF1Q13972 1273 aa15□□□□□ -0.01
TPM1-209ENST00000558072 SLF2Q8IX21 1173 aa15□□□□□ -0.01
TPM1-209ENST00000558072 LARGE2Q8N3Y3 721 aa15□□□□□ -0.01
TPM1-209ENST00000558072 FBXW7Q969H0 707 aa15□□□□□ -0.01
TPM1-209ENST00000558072 SNRKQ9NRH2 765 aa15□□□□□ -0.01
TPM1-209ENST00000558072 DIAPH3Q9NSV4 1193 aa15□□□□□ -0.01
TPM1-209ENST00000558072 HMG20BQ9P0W2 317 aa15□□□□□ -0.01
TPM1-209ENST00000558072 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 ZNF541Q9H0D2 1346 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 GOLIM4O00461 696 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 MAP4K4O95819 1239 aaPredicted RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 MMP14P50281 582 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 FKBP1AP62942 108 aaKnown RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 CHAF1AQ13111 956 aaPredicted RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 JDP2Q8WYK2 163 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 AKAP11Q9UKA4 1901 aa14.99□□□□□ -0.01
TPM1-209ENST00000558072 GOLGB1Q14789 3259 aaKnown RBP14.99□□□□□ -0.01
TPM1-209ENST00000558072 FAM205AQ6ZU69 1335 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 GRIN3BO60391 1043 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 ZAP70P43403 619 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 C9orf131Q5VYM1 1079 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 CERS3Q8IU89 383 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 NIM1KQ8IY84 436 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 PSME4Q14997 1843 aa14.98□□□□□ -0.01
TPM1-209ENST00000558072 MAST3O60307 1309 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 RAD50Q92878 1312 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 EPB41L2O43491 1005 aaKnown RBP14.97□□□□□ -0.01
TPM1-209ENST00000558072 RAD17O75943 681 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 REC8O95072 547 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 GSTO1P78417 241 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 GRIK5Q16478 980 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 STRIP1Q5VSL9 837 aa14.97□□□□□ -0.01
TPM1-209ENST00000558072 MYO3BQ8WXR4 1341 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 DCAF8L1A6NGE4 600 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 CYP2E1P05181 493 aaPredicted RBP14.96□□□□□ -0.01
TPM1-209ENST00000558072 LDHCP07864 332 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 UBE3CQ15386 1083 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 HELLSQ9NRZ9 838 aa14.96□□□□□ -0.01
TPM1-209ENST00000558072 USP17L3A6NCW0 530 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 USP17L4A6NCW7 530 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 RNF113AO15541 343 aaKnown RBP14.95□□□□□ -0.02
TPM1-209ENST00000558072 IDH1O75874 414 aaKnown RBP14.95□□□□□ -0.02
TPM1-209ENST00000558072 LDHBP07195 334 aaKnown RBP14.95□□□□□ -0.02
TPM1-209ENST00000558072 LMNB1P20700 586 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 CHMLP26374 656 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 KIAA1211Q6ZU35 1233 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 USP17L1Q7RTZ2 530 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 ANTXR1Q9H6X2 564 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 ABCF2Q9UG63 623 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 ZNRF3Q9ULT6 936 aa14.95□□□□□ -0.02
TPM1-209ENST00000558072 SHTN1A0MZ66 631 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms