RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 PAWRQ96IZ0 340 aaKnown RBP12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 UBE2OQ9C0C9 1292 aaKnown RBP12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 SEC31BQ9NQW1 1179 aa12.8□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TNFRSF10AO00220 468 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 GNRH1P01148 92 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PSMC4P43686 418 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 IREB2P48200 963 aaKnown RBP12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 KIAA0825Q8IV33 1275 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 ANKRD13AQ8IZ07 590 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 SYMPKQ92797 1274 aaKnown RBP12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 PCDHAC2Q9Y5I4 1007 aa12.79□□□□□ -0.36
IGKV2D-28-202ENST00000558026 UNCXA6NJT0 531 aa12.78□□□□□ -0.36
IGKV2D-28-202ENST00000558026 TFRCP02786 760 aaKnown RBP12.78□□□□□ -0.36
IGKV2D-28-202ENST00000558026 UBXN2AP68543 259 aa12.78□□□□□ -0.36
IGKV2D-28-202ENST00000558026 HSP90AB3PQ58FF7 597 aa12.78□□□□□ -0.36
IGKV2D-28-202ENST00000558026 CLRN2A0PK11 232 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MAP3K12Q12852 859 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 FAM109BQ6ICB4 259 aaPredicted RBP12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 COPS6Q7L5N1 327 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 DEFB118Q96PH6 123 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CDX2Q99626 313 aaPredicted RBP12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MYPNQ86TC9 1320 aa12.77□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ECM29Q5VYK3 1845 aa12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 FMNL1O95466 1100 aaPredicted RBP12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 GTF2A2P52657 109 aa12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 SUPT20HL1Q3ZLR7 823 aa12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 XAGE3Q8WTP9 111 aa12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 AOX1Q06278 1338 aa12.76□□□□□ -0.37
IGKV2D-28-202ENST00000558026 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 PRKCZQ05513 592 aa12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CC2D1BQ5T0F9 858 aaKnown RBP12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 STRIP1Q5VSL9 837 aa12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MYO3BQ8WXR4 1341 aa12.75□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ZNF804BA4D1E1 1349 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 XDHP47989 1333 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 HOXD10P28358 340 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CNGB1Q14028 1251 aaPredicted RBP12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 C17orf99Q6UX52 265 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 NECAB2Q7Z6G3 386 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 GABRQQ9UN88 632 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 PPP2R3BQ9Y5P8 575 aa12.74□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ATP5J2-PTCD1G3V325 749 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 WDHD1O75717 1129 aaPredicted RBP12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ELNP15502 786 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 VGLL4Q14135 290 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 DLGAP5Q15398 846 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ZNF697Q5TEC3 545 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
IGKV2D-28-202ENST00000558026 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 DLG5Q8TDM6 1919 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MGAMO43451 1857 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 IRS4O14654 1257 aaPredicted RBP12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 INHAP05111 366 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 RASA3Q14644 834 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 TTLL5Q6EMB2 1281 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 PNISRQ8TF01 805 aaKnown RBP12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MED23Q9ULK4 1368 aa12.71□□□□□ -0.37
IGKV2D-28-202ENST00000558026 MDM2Q00987 491 aaPredicted RBP12.71□□□□□ -0.37
IGKV2D-28-202ENST00000558026 TJAP1Q5JTD0 557 aa12.71□□□□□ -0.37
IGKV2D-28-202ENST00000558026 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
IGKV2D-28-202ENST00000558026 SNX27Q96L92 541 aa12.71□□□□□ -0.37
IGKV2D-28-202ENST00000558026 SPEF2Q9C093 1822 aa12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 ADCY3O60266 1144 aa12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 CETPP11597 493 aa12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 GTF2IP78347 998 aa12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 HELBQ8NG08 1087 aaPredicted RBP12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 PRMT6Q96LA8 375 aaPredicted RBP12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 ISCA1Q9BUE6 129 aa12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
IGKV2D-28-202ENST00000558026 ADGRA2Q96PE1 1338 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 F8W031 263 aaPredicted RBP12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 KLRK1P26718 216 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 MMP14P50281 582 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 SEMA6BQ9H3T3 888 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 CDH23Q9H251 3354 aa12.69□□□□□ -0.38
IGKV2D-28-202ENST00000558026 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 CFAP100Q494V2 611 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 USP38Q8NB14 1042 aa12.68□□□□□ -0.38
IGKV2D-28-202ENST00000558026 MTMR14Q8NCE2 650 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms