RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CLASRPQ8N2M8 674 aaKnown RBP31.41■■■□□ 2.62
SMAD6-202ENST00000557916 CCDC8Q9H0W5 538 aaPredicted RBP31.41■■■□□ 2.62
SMAD6-202ENST00000557916 CNOT7Q9UIV1 285 aaKnown RBP31.41■■■□□ 2.62
SMAD6-202ENST00000557916 MYO3BQ8WXR4 1341 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 KIF3CO14782 793 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 CHAF1AQ13111 956 aaPredicted RBP31.41■■■□□ 2.62
SMAD6-202ENST00000557916 AACSQ86V21 672 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 GMLQ99445 158 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 DBNDD2Q9BQY9 259 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 LRRCC1Q9C099 1032 aa31.41■■■□□ 2.62
SMAD6-202ENST00000557916 MICALL2Q8IY33 904 aa31.4■■■□□ 2.62
SMAD6-202ENST00000557916 BCL11AQ9H165 835 aa31.4■■■□□ 2.62
SMAD6-202ENST00000557916 RWDD1Q9H446 243 aaPredicted RBP31.4■■■□□ 2.62
SMAD6-202ENST00000557916 TAF1DQ9H5J8 278 aaPredicted RBP31.4■■■□□ 2.62
SMAD6-202ENST00000557916 SCN4AP35499 1836 aa31.39■■■□□ 2.62
SMAD6-202ENST00000557916 EPHX2P34913 555 aa31.39■■■□□ 2.62
SMAD6-202ENST00000557916 FKBP1AP62942 108 aaKnown RBP31.38■■■□□ 2.61
SMAD6-202ENST00000557916 TLR7Q9NYK1 1049 aaKnown RBP31.38■■■□□ 2.61
SMAD6-202ENST00000557916 DBNLQ9UJU6 430 aaKnown RBP31.38■■■□□ 2.61
SMAD6-202ENST00000557916 SHTN1A0MZ66 631 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 H7C1D1 291 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 SEMA3EO15041 775 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 CCDC158Q5M9N0 1113 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 CERS5Q8N5B7 392 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 DENND2AQ9ULE3 1009 aa31.37■■■□□ 2.61
SMAD6-202ENST00000557916 ZNF646O15015 1829 aaPredicted RBP31.37■■■□□ 2.61
SMAD6-202ENST00000557916 USP17L8P0C7I0 530 aa31.36■■■□□ 2.61
SMAD6-202ENST00000557916 MFSD14BQ5SR56 506 aa31.36■■■□□ 2.61
SMAD6-202ENST00000557916 C16orf71Q8IYS4 520 aaPredicted RBP31.36■■■□□ 2.61
SMAD6-202ENST00000557916 ZBTB22O15209 634 aa31.35■■■□□ 2.61
SMAD6-202ENST00000557916 SMARCA5O60264 1052 aaPredicted RBP31.35■■■□□ 2.61
SMAD6-202ENST00000557916 TBC1D22AQ8WUA7 517 aa31.35■■■□□ 2.61
SMAD6-202ENST00000557916 ADARB2Q9NS39 739 aaKnown RBP31.35■■■□□ 2.61
SMAD6-202ENST00000557916 IFIT2P09913 472 aaKnown RBP31.34■■■□□ 2.61
SMAD6-202ENST00000557916 RASGRF1Q13972 1273 aa31.34■■■□□ 2.61
SMAD6-202ENST00000557916 TTC39AQ5SRH9 613 aa31.34■■■□□ 2.61
SMAD6-202ENST00000557916 KIAA0825Q8IV33 1275 aa31.34■■■□□ 2.61
SMAD6-202ENST00000557916 GCC1Q96CN9 775 aa31.34■■■□□ 2.61
SMAD6-202ENST00000557916 UQCRFS1P1P0C7P4 283 aa31.33■■■□□ 2.61
SMAD6-202ENST00000557916 ARID4AP29374 1257 aaPredicted RBP31.33■■■□□ 2.61
SMAD6-202ENST00000557916 PNMA8AQ86V59 439 aaPredicted RBP31.33■■■□□ 2.61
SMAD6-202ENST00000557916 WDR66Q8TBY9 1149 aa31.33■■■□□ 2.61
SMAD6-202ENST00000557916 COL1A1P02452 1464 aaPredicted RBP31.33■■■□□ 2.61
SMAD6-202ENST00000557916 IGHDP01880 384 aa31.32■■■□□ 2.61
SMAD6-202ENST00000557916 ZNF280AP59817 542 aaPredicted RBP31.32■■■□□ 2.61
SMAD6-202ENST00000557916 EAPPQ56P03 285 aaPredicted RBP31.32■■■□□ 2.61
SMAD6-202ENST00000557916 OGFOD1Q8N543 542 aa31.32■■■□□ 2.61
SMAD6-202ENST00000557916 USP50Q70EL3 339 aaPredicted RBP31.32■■■□□ 2.6
SMAD6-202ENST00000557916 SAMD7Q7Z3H4 446 aa31.32■■■□□ 2.6
SMAD6-202ENST00000557916 F8W031 263 aaPredicted RBP31.31■■■□□ 2.6
SMAD6-202ENST00000557916 TBC1D10BQ4KMP7 808 aaPredicted RBP31.3■■■□□ 2.6
SMAD6-202ENST00000557916 ZNF512BQ96KM6 892 aaPredicted RBP31.3■■■□□ 2.6
SMAD6-202ENST00000557916 HMG20BQ9P0W2 317 aa31.3■■■□□ 2.6
SMAD6-202ENST00000557916 HDAC9Q9UKV0 1011 aa31.3■■■□□ 2.6
SMAD6-202ENST00000557916 PDS5AQ29RF7 1337 aaKnown RBP31.3■■■□□ 2.6
SMAD6-202ENST00000557916 NEFLP07196 543 aa31.29■■■□□ 2.6
SMAD6-202ENST00000557916 MCAMP43121 646 aa31.29■■■□□ 2.6
SMAD6-202ENST00000557916 MMP14P50281 582 aa31.29■■■□□ 2.6
SMAD6-202ENST00000557916 RBM26Q5T8P6 1007 aaKnown RBP31.29■■■□□ 2.6
SMAD6-202ENST00000557916 SPATA5Q8NB90 893 aa31.29■■■□□ 2.6
SMAD6-202ENST00000557916 TRPM4Q8TD43 1214 aa31.29■■■□□ 2.6
SMAD6-202ENST00000557916 MYH13Q9UKX3 1938 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 TOMM70O94826 608 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 POTEIP0CG38 1075 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 POTEJP0CG39 1038 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 SCARF1Q14162 830 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 MYOZ2Q9NPC6 264 aa31.28■■■□□ 2.6
SMAD6-202ENST00000557916 EGFRP00533 1210 aa31.27■■■□□ 2.6
SMAD6-202ENST00000557916 GRIK5Q16478 980 aa31.27■■■□□ 2.6
SMAD6-202ENST00000557916 ANKRD45Q5TZF3 282 aa31.27■■■□□ 2.6
SMAD6-202ENST00000557916 PI16Q6UXB8 463 aa31.27■■■□□ 2.6
SMAD6-202ENST00000557916 ZBTB47Q9UFB7 747 aaPredicted RBP31.27■■■□□ 2.6
SMAD6-202ENST00000557916 TTF2Q9UNY4 1162 aaKnown RBP31.27■■■□□ 2.6
SMAD6-202ENST00000557916 CLEC11AQ9Y240 323 aa31.27■■■□□ 2.6
SMAD6-202ENST00000557916 HIRAP54198 1017 aaPredicted RBP31.26■■■□□ 2.6
SMAD6-202ENST00000557916 KIF4BQ2VIQ3 1234 aa31.26■■■□□ 2.6
SMAD6-202ENST00000557916 SMC5Q8IY18 1101 aa31.26■■■□□ 2.6
SMAD6-202ENST00000557916 SUGT1Q9Y2Z0 365 aa31.26■■■□□ 2.6
SMAD6-202ENST00000557916 SALL1Q9NSC2 1324 aa31.26■■■□□ 2.6
SMAD6-202ENST00000557916 LDHDQ86WU2 507 aa31.25■■■□□ 2.59
SMAD6-202ENST00000557916 SNRKQ9NRH2 765 aa31.25■■■□□ 2.59
SMAD6-202ENST00000557916 ZGPATQ8N5A5 531 aaKnown RBP31.24■■■□□ 2.59
SMAD6-202ENST00000557916 RBM46Q8TBY0 533 aaKnown RBP31.24■■■□□ 2.59
SMAD6-202ENST00000557916 ABCF2Q9UG63 623 aa31.23■■■□□ 2.59
SMAD6-202ENST00000557916 LDHBP07195 334 aaKnown RBP31.22■■■□□ 2.59
SMAD6-202ENST00000557916 PRDX5P30044 214 aa31.22■■■□□ 2.59
SMAD6-202ENST00000557916 B4GALNT3Q6L9W6 998 aa31.21■■■□□ 2.59
SMAD6-202ENST00000557916 CHADLQ6NUI6 762 aa31.21■■■□□ 2.59
SMAD6-202ENST00000557916 ZAP70P43403 619 aa31.2■■■□□ 2.59
SMAD6-202ENST00000557916 SPTY2D1Q68D10 685 aaPredicted RBP31.2■■■□□ 2.59
SMAD6-202ENST00000557916 TBC1D9Q6ZT07 1266 aa31.2■■■□□ 2.59
SMAD6-202ENST00000557916 SMC1BQ8NDV3 1235 aa31.2■■■□□ 2.59
SMAD6-202ENST00000557916 ZC3H15Q8WU90 426 aaKnown RBP31.2■■■□□ 2.59
SMAD6-202ENST00000557916 SERPINA10Q9UK55 444 aa31.2■■■□□ 2.59
SMAD6-202ENST00000557916 MAST3O60307 1309 aa31.19■■■□□ 2.58
SMAD6-202ENST00000557916 RBM5P52756 815 aaKnown RBP eCLIP31.19■■■□□ 2.58
SMAD6-202ENST00000557916 DLGAP5Q15398 846 aa31.19■■■□□ 2.58
SMAD6-202ENST00000557916 CFAP100Q494V2 611 aa31.19■■■□□ 2.58
SMAD6-202ENST00000557916 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.19■■■□□ 2.58
SMAD6-202ENST00000557916 ADAMTSL1Q8N6G6 1762 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms