RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 IL15P40933 162 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-211ENST00000557623 PUM3Q15397 648 aaKnown RBP15.53■□□□□ 0.08
SLIRP-211ENST00000557623 TTLL5Q6EMB2 1281 aa15.53■□□□□ 0.08
SLIRP-211ENST00000557623 FBXW7Q969H0 707 aa15.53■□□□□ 0.08
SLIRP-211ENST00000557623 SIL1Q9H173 461 aa15.53■□□□□ 0.08
SLIRP-211ENST00000557623 CHMP4BQ9H444 224 aaKnown RBP15.53■□□□□ 0.08
SLIRP-211ENST00000557623 CIZ1Q9ULV3 898 aaPredicted RBP15.53■□□□□ 0.08
SLIRP-211ENST00000557623 IFIT1P09914 478 aaKnown RBP15.52■□□□□ 0.08
SLIRP-211ENST00000557623 IL1R1P14778 569 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
SLIRP-211ENST00000557623 MMP14P50281 582 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 APLP1P51693 650 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 ATG9AQ7Z3C6 839 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 CEP126Q9P2H0 1117 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 DDX19BQ9UMR2 479 aa15.52■□□□□ 0.08
SLIRP-211ENST00000557623 TRPM7Q96QT4 1865 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 GTF2IP78347 998 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 PDE3AQ14432 1141 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 MVPQ14764 893 aaKnown RBP15.51■□□□□ 0.07
SLIRP-211ENST00000557623 DACT2Q5SW24 774 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 VPS37DQ86XT2 251 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 ZC3H15Q8WU90 426 aaKnown RBP15.51■□□□□ 0.07
SLIRP-211ENST00000557623 LPIN2Q92539 896 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 PA2G4Q9UQ80 394 aaKnown RBP15.51■□□□□ 0.07
SLIRP-211ENST00000557623 ARAP2Q8WZ64 1704 aa15.51■□□□□ 0.07
SLIRP-211ENST00000557623 POLR2AP24928 1970 aaKnown RBP15.51■□□□□ 0.07
SLIRP-211ENST00000557623 USP17L8P0C7I0 530 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 SLC5A1P13866 664 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 FGFR2P21802 821 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 GYG1P46976 350 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 ATP8B2P98198 1209 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 FAM84BQ96KN1 310 aaPredicted RBP15.5■□□□□ 0.07
SLIRP-211ENST00000557623 GMLQ99445 158 aa15.5■□□□□ 0.07
SLIRP-211ENST00000557623 PNMA6EA0A0J9YXQ4 647 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 SHTN1A0MZ66 631 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 GABBR2O75899 941 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 SASH1O94885 1247 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 ZNF280AP59817 542 aaPredicted RBP15.49■□□□□ 0.07
SLIRP-211ENST00000557623 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
SLIRP-211ENST00000557623 SAMD7Q7Z3H4 446 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 FBXO33Q7Z6M2 555 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 OGFOD1Q8N543 542 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 TDRD7Q8NHU6 1098 aaKnown RBP15.49■□□□□ 0.07
SLIRP-211ENST00000557623 TRPM4Q8TD43 1214 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 COG6Q9Y2V7 657 aa15.49■□□□□ 0.07
SLIRP-211ENST00000557623 G3BP1Q13283 466 aaKnown RBP eCLIP15.48■□□□□ 0.07
SLIRP-211ENST00000557623 ATP2B3Q16720 1220 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 KIF4BQ2VIQ3 1234 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 TBC1D10BQ4KMP7 808 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-211ENST00000557623 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
SLIRP-211ENST00000557623 SSH3Q8TE77 659 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 C1orf115Q9H7X2 142 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 PGAP2Q9UHJ9 254 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 HDAC9Q9UKV0 1011 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
SLIRP-211ENST00000557623 ECM29Q5VYK3 1845 aa15.47■□□□□ 0.07
SLIRP-211ENST00000557623 FAM205AQ6ZU69 1335 aa15.47■□□□□ 0.07
SLIRP-211ENST00000557623 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
SLIRP-211ENST00000557623 FRAT2O75474 233 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-211ENST00000557623 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-211ENST00000557623 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-211ENST00000557623 RBM26Q5T8P6 1007 aaKnown RBP15.47■□□□□ 0.07
SLIRP-211ENST00000557623 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
SLIRP-211ENST00000557623 MYOZ2Q9NPC6 264 aa15.47■□□□□ 0.07
SLIRP-211ENST00000557623 BCAMP50895 628 aa15.45■□□□□ 0.06
SLIRP-211ENST00000557623 CEP85Q6P2H3 762 aa15.45■□□□□ 0.06
SLIRP-211ENST00000557623 KIAA0825Q8IV33 1275 aa15.45■□□□□ 0.06
SLIRP-211ENST00000557623 TBC1D22AQ8WUA7 517 aa15.45■□□□□ 0.06
SLIRP-211ENST00000557623 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
SLIRP-211ENST00000557623 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
SLIRP-211ENST00000557623 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
SLIRP-211ENST00000557623 EGFRP00533 1210 aa15.44■□□□□ 0.06
SLIRP-211ENST00000557623 TFCP2Q12800 502 aa15.44■□□□□ 0.06
SLIRP-211ENST00000557623 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-211ENST00000557623 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
SLIRP-211ENST00000557623 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-211ENST00000557623 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
SLIRP-211ENST00000557623 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
SLIRP-211ENST00000557623 HMMRO75330 724 aa15.43■□□□□ 0.06
SLIRP-211ENST00000557623 SCARF1Q14162 830 aa15.43■□□□□ 0.06
SLIRP-211ENST00000557623 MFSD14BQ5SR56 506 aa15.43■□□□□ 0.06
SLIRP-211ENST00000557623 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
SLIRP-211ENST00000557623 CERS5Q8N5B7 392 aa15.43■□□□□ 0.06
SLIRP-211ENST00000557623 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
SLIRP-211ENST00000557623 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
SLIRP-211ENST00000557623 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
SLIRP-211ENST00000557623 SEMA3EO15041 775 aa15.42■□□□□ 0.06
SLIRP-211ENST00000557623 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-211ENST00000557623 IQSEC3Q9UPP2 1182 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-211ENST00000557623 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
SLIRP-211ENST00000557623 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
SLIRP-211ENST00000557623 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
SLIRP-211ENST00000557623 PYGBP11216 843 aa15.41■□□□□ 0.06
SLIRP-211ENST00000557623 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
SLIRP-211ENST00000557623 TIMM10P62072 90 aa15.41■□□□□ 0.06
SLIRP-211ENST00000557623 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
SLIRP-211ENST00000557623 KRT26Q7Z3Y9 468 aa15.41■□□□□ 0.06
SLIRP-211ENST00000557623 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms