RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 PTCH2Q9Y6C5 1203 aa10.41□□□□□ -0.74
PCNX1-215ENST00000557428 TRIOBPQ9H2D6 2365 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 ELL2O00472 640 aaPredicted RBP10.4□□□□□ -0.74
PCNX1-215ENST00000557428 MYO1BO43795 1136 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 GJA5P36382 358 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 IGHMBP2P38935 993 aaKnown RBP10.4□□□□□ -0.74
PCNX1-215ENST00000557428 RBM5P52756 815 aaKnown RBP eCLIP10.4□□□□□ -0.74
PCNX1-215ENST00000557428 TXNRD3Q86VQ6 643 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 GREM2Q9H772 168 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
PCNX1-215ENST00000557428 ZNF804BA4D1E1 1349 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 CEP290O15078 2479 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 DLL1O00548 723 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 CAP1Q01518 475 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 MKRN4PQ13434 485 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-215ENST00000557428 ARHGEF6Q15052 776 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 TAF1CQ15572 869 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-215ENST00000557428 SUPT20HL1Q3ZLR7 823 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 DPF3Q92784 378 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 BSDC1Q9NW68 430 aaPredicted RBP10.39□□□□□ -0.75
PCNX1-215ENST00000557428 JAG2Q9Y219 1238 aa10.39□□□□□ -0.75
PCNX1-215ENST00000557428 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
PCNX1-215ENST00000557428 CFAP100Q494V2 611 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 NBPF12Q5TAG4 269 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-215ENST00000557428 ANKRD13AQ8IZ07 590 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 OPTNQ96CV9 577 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 METTL22Q9BUU2 404 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-215ENST00000557428 MBIPQ9NS73 344 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 TRIM35Q9UPQ4 493 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 MAP3K2Q9Y2U5 619 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 LEMD3Q9Y2U8 911 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 PPP2R3BQ9Y5P8 575 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 A0A1B0GUL6 1792 aa10.38□□□□□ -0.75
PCNX1-215ENST00000557428 SPDYE4A6NLX3 237 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 ABCB7O75027 752 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 MMP14P50281 582 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
PCNX1-215ENST00000557428 MAP3K11Q16584 847 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 TTLL11Q8NHH1 800 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 ZBED3Q96IU2 234 aaPredicted RBP10.37□□□□□ -0.75
PCNX1-215ENST00000557428 MPHOSPH8Q99549 860 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 PTPN18Q99952 460 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 ZFYVE28Q9HCC9 887 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
PCNX1-215ENST00000557428 CCL15-CCL14A0A0B4J2E2 113 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 USP2O75604 605 aaPredicted RBP10.36□□□□□ -0.75
PCNX1-215ENST00000557428 NEXNQ0ZGT2 675 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 KIF22Q14807 665 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 CCL15Q16663 113 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 CERS5Q8N5B7 392 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 RUNDC1Q96C34 613 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 ANKRD2Q9GZV1 360 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
PCNX1-215ENST00000557428 ARAP2Q8WZ64 1704 aa10.36□□□□□ -0.75
PCNX1-215ENST00000557428 AOX1Q06278 1338 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 WDHD1O75717 1129 aaPredicted RBP10.35□□□□□ -0.75
PCNX1-215ENST00000557428 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 ITGA6P23229 1130 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 RASA3Q14644 834 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 CWF19L2Q2TBE0 894 aaKnown RBP10.35□□□□□ -0.75
PCNX1-215ENST00000557428 BRI3BPQ8WY22 251 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 ARHGAP39Q9C0H5 1083 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 CD209Q9NNX6 404 aa10.35□□□□□ -0.75
PCNX1-215ENST00000557428 SNAP23O00161 211 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 TAF5LO75529 589 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 IGKV5-2P06315 115 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 GTF2A2P52657 109 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 CHRNDQ07001 517 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 ZNF804AQ7Z570 1209 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 HELBQ8NG08 1087 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-215ENST00000557428 PRMT6Q96LA8 375 aaPredicted RBP10.34□□□□□ -0.75
PCNX1-215ENST00000557428 CHMP3Q9Y3E7 222 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 CSADQ9Y600 493 aa10.34□□□□□ -0.75
PCNX1-215ENST00000557428 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
PCNX1-215ENST00000557428 PI4KAP2A4QPH2 592 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 UNCXA6NJT0 531 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 TCP10L2B9ZVM9 353 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 TNFAIP1Q13829 316 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 VGLL4Q14135 290 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 CCDC30Q5VVM6 783 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 FAM43AQ8N2R8 423 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 PI4KAP1Q8N8J0 262 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
PCNX1-215ENST00000557428 BIN2Q9UBW5 565 aaPredicted RBP10.33□□□□□ -0.76
PCNX1-215ENST00000557428 PLIN1O60240 522 aa10.32□□□□□ -0.76
PCNX1-215ENST00000557428 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-215ENST00000557428 MTFR1Q15390 333 aa10.32□□□□□ -0.76
PCNX1-215ENST00000557428 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
PCNX1-215ENST00000557428 SHISA4Q96DD7 197 aa10.32□□□□□ -0.76
PCNX1-215ENST00000557428 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
PCNX1-215ENST00000557428 TDRD3Q9H7E2 651 aaKnown RBP10.32□□□□□ -0.76
PCNX1-215ENST00000557428 ZNF70Q9UC06 446 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-215ENST00000557428 ANKRD18BA2A2Z9 1011 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 NEURL1BA8MQ27 555 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms