RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 IGHA2P01877 340 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 SPATA31C1P0DKV0 1188 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 HDLBPQ00341 1268 aaKnown RBP4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 NRG1Q02297 640 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 TRIM28Q13263 835 aaKnown RBP4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 IKBKEQ14164 716 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 TRAPPC3LQ5T215 181 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 CCNJLQ8IV13 435 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 ASAP3Q8TDY4 903 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 UBXN4Q92575 508 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 CRELD1Q96HD1 420 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 ZKSCAN3Q9BRR0 538 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 ADAM19Q9H013 955 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 CLEC4MQ9H2X3 399 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 OSGEPQ9NPF4 335 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 VTI1BQ9UEU0 232 aa4.69□□□□□ -1.66
HMGB1P14-201ENST00000557424 A0A1W2PP55 124 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 ARHGEF15O94989 841 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 ALBP02768 609 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 ELNP15502 786 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 ERCC5P28715 1186 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 RAD51AP2Q09MP3 1159 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 AP3B2Q13367 1082 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 PWP1Q13610 501 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 SCARA3Q6AZY7 606 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 GDF6Q6KF10 455 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 HFE2Q6ZVN8 426 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 TMC4Q7Z404 712 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 DHX37Q8IY37 1157 aaKnown RBP4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 IL22RA1Q8N6P7 574 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 ANKRD24Q8TF21 1146 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 NUDT8Q8WV74 236 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 RASSF4Q9H2L5 321 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 SEC31BQ9NQW1 1179 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 KLF15Q9UIH9 416 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 NAGPAQ9UK23 515 aa4.68□□□□□ -1.66
HMGB1P14-201ENST00000557424 TMEM238LA0A1B0GVL6 79 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 ZBTB42B2RXF5 422 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 SHISA8B8ZZ34 492 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 J3QW42 95 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 CYP11A1P05108 521 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 CYP2E1P05181 493 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 ITPKAP23677 461 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 ST13P50502 369 aaKnown RBP4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 AFF1P51825 1210 aaKnown RBP4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 KCNMA1Q12791 1236 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 GRIN2CQ14957 1233 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 C20orf204Q6ZNR8 217 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 DPH6Q7L8W6 267 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 KRTAP1-3Q8IUG1 177 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 NXPE3Q969Y0 559 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 FAM161BQ96MY7 647 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 DNAJC2Q99543 621 aaKnown RBP4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 DUSP9Q99956 384 aaKnown RBP4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 EMILIN2Q9BXX0 1053 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 BCO2Q9BYV7 579 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 AK5Q9Y6K8 562 aa4.67□□□□□ -1.66
HMGB1P14-201ENST00000557424 A0A096LPE4 126 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 A0A1W2PPZ6 126 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 POLR3DP05423 398 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 DAB2P98082 770 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 ATP11AP98196 1134 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 C19orf57Q0VDD7 668 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 MRPL58Q14197 206 aaKnown RBP4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 GRM2Q14416 872 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 LRRC14Q15048 493 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 PARP2Q9UGN5 583 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 TTF2Q9UNY4 1162 aaKnown RBP4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 ADAMTS8Q9UP79 889 aa4.66□□□□□ -1.66
HMGB1P14-201ENST00000557424 ANKRD62A6NC57 917 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 C9orf172C9J069 976 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 B3GALT4O96024 378 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 NID1P14543 1247 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 PCDH1Q08174 1060 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 PEAR1Q5VY43 1037 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 DHX38Q92620 1227 aaKnown RBP4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 CORO1BQ9BR76 489 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 POLR3GLQ9BT43 218 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 CEP41Q9BYV8 373 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 MRPL18Q9H0U6 180 aaKnown RBP4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 GPN3Q9UHW5 284 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 HCN2Q9UL51 889 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 SOX13Q9UN79 622 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 TRIM33Q9UPN9 1127 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 STARD13Q9Y3M8 1113 aa4.65□□□□□ -1.67
HMGB1P14-201ENST00000557424 USP17L7P0C7H9 530 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 FCGRTP55899 365 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 SF3A1Q15459 793 aaKnown RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 COL13A1Q5TAT6 717 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 USPL1Q5W0Q7 1092 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 IGF2-ASQ6U949 168 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 SV2BQ7L1I2 683 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 METTL16Q86W50 562 aaKnown RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 FBXO11Q86XK2 927 aa4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 FMR1NBQ8N0W7 255 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 EPS8L3Q8TE67 593 aaKnown RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 POP1Q99575 1024 aaKnown RBP4.64□□□□□ -1.67
HMGB1P14-201ENST00000557424 TINF2Q9BSI4 451 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms