RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PASKQ96RG2 1323 aa15.47■□□□□ 0.07
SLIRP-209ENST00000557342 FRAT2O75474 233 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-209ENST00000557342 ITGBL1O95965 494 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-209ENST00000557342 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-209ENST00000557342 RBM26Q5T8P6 1007 aaKnown RBP15.47■□□□□ 0.07
SLIRP-209ENST00000557342 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
SLIRP-209ENST00000557342 MYOZ2Q9NPC6 264 aa15.47■□□□□ 0.07
SLIRP-209ENST00000557342 BCAMP50895 628 aa15.45■□□□□ 0.06
SLIRP-209ENST00000557342 CEP85Q6P2H3 762 aa15.45■□□□□ 0.06
SLIRP-209ENST00000557342 KIAA0825Q8IV33 1275 aa15.45■□□□□ 0.06
SLIRP-209ENST00000557342 TBC1D22AQ8WUA7 517 aa15.45■□□□□ 0.06
SLIRP-209ENST00000557342 ZBTB40Q9NUA8 1239 aa15.45■□□□□ 0.06
SLIRP-209ENST00000557342 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
SLIRP-209ENST00000557342 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
SLIRP-209ENST00000557342 EGFRP00533 1210 aa15.44■□□□□ 0.06
SLIRP-209ENST00000557342 TFCP2Q12800 502 aa15.44■□□□□ 0.06
SLIRP-209ENST00000557342 OS9Q13438 667 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-209ENST00000557342 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
SLIRP-209ENST00000557342 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
SLIRP-209ENST00000557342 DCPSQ96C86 337 aaKnown RBP15.44■□□□□ 0.06
SLIRP-209ENST00000557342 HMMRO75330 724 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 SCARF1Q14162 830 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 MFSD14BQ5SR56 506 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 C20orf194Q5TEA3 1177 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 CERS5Q8N5B7 392 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
SLIRP-209ENST00000557342 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
SLIRP-209ENST00000557342 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 TMEM88BA6NKF7 163 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 SEMA3EO15041 775 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 ZBTB22O15209 634 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 CHAF1AQ13111 956 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-209ENST00000557342 IQSEC3Q9UPP2 1182 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-209ENST00000557342 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 PITPNM2Q9BZ72 1349 aa15.42■□□□□ 0.06
SLIRP-209ENST00000557342 F8W031 263 aaPredicted RBP15.41■□□□□ 0.06
SLIRP-209ENST00000557342 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
SLIRP-209ENST00000557342 TIMM10P62072 90 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 HSP90AB4PQ58FF6 505 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 KRT26Q7Z3Y9 468 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 SULF1Q8IWU6 871 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 WDR66Q8TBY9 1149 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 GLIS2Q9BZE0 524 aaPredicted RBP15.41■□□□□ 0.06
SLIRP-209ENST00000557342 GPR108Q9NPR9 543 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 GGA3Q9NZ52 723 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 SUGT1Q9Y2Z0 365 aa15.41■□□□□ 0.06
SLIRP-209ENST00000557342 WNT10BO00744 389 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 DLGAP5Q15398 846 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 ANGEL2Q5VTE6 544 aaKnown RBP15.4■□□□□ 0.06
SLIRP-209ENST00000557342 CCDC102BQ68D86 513 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 USP48Q86UV5 1035 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 ERC1Q8IUD2 1116 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 NEUROD6Q96NK8 337 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
SLIRP-209ENST00000557342 TTF2Q9UNY4 1162 aaKnown RBP15.4■□□□□ 0.06
SLIRP-209ENST00000557342 TRAF5O00463 557 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 MYO1BO43795 1136 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 ADORA1P30542 326 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 PHKA1P46020 1223 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 NBPF9Q3BBW0 867 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 GORABQ5T7V8 394 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 MAST3O60307 1309 aa15.39■□□□□ 0.05
SLIRP-209ENST00000557342 RBM5P52756 815 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLIRP-209ENST00000557342 HTRA3P83110 453 aa15.38■□□□□ 0.05
SLIRP-209ENST00000557342 HDLBPQ00341 1268 aaKnown RBP15.38■□□□□ 0.05
SLIRP-209ENST00000557342 CFAP100Q494V2 611 aa15.38■□□□□ 0.05
SLIRP-209ENST00000557342 TNNI3KQ59H18 835 aa15.38■□□□□ 0.05
SLIRP-209ENST00000557342 ZBED3Q96IU2 234 aaPredicted RBP15.38■□□□□ 0.05
SLIRP-209ENST00000557342 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
SLIRP-209ENST00000557342 FPGT-TNNI3KV9GXZ4 949 aa15.38■□□□□ 0.05
SLIRP-209ENST00000557342 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
SLIRP-209ENST00000557342 PDS5AQ29RF7 1337 aaKnown RBP15.38■□□□□ 0.05
SLIRP-209ENST00000557342 CELF2O95319 508 aaKnown RBP15.37■□□□□ 0.05
SLIRP-209ENST00000557342 APOBEC3FQ8IUX4 373 aaKnown RBP15.37■□□□□ 0.05
SLIRP-209ENST00000557342 ZGPATQ8N5A5 531 aaKnown RBP15.37■□□□□ 0.05
SLIRP-209ENST00000557342 DNAJC5GQ8N7S2 189 aa15.37■□□□□ 0.05
SLIRP-209ENST00000557342 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
SLIRP-209ENST00000557342 MRIQ9BWK5 157 aa15.37■□□□□ 0.05
SLIRP-209ENST00000557342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.37■□□□□ 0.05
SLIRP-209ENST00000557342 SALL1Q9NSC2 1324 aa15.37■□□□□ 0.05
SLIRP-209ENST00000557342 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
SLIRP-209ENST00000557342 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 ADM5C9JUS6 153 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
SLIRP-209ENST00000557342 CST9Q5W186 159 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 ABT1Q9ULW3 272 aaKnown RBP15.36■□□□□ 0.05
SLIRP-209ENST00000557342 EXOC6BQ9Y2D4 811 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 MYH2Q9UKX2 1941 aa15.36■□□□□ 0.05
SLIRP-209ENST00000557342 CRKP46108 304 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 CCDC158Q5M9N0 1113 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 TEKT1Q969V4 418 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 PRMT6Q96LA8 375 aaPredicted RBP15.35■□□□□ 0.05
SLIRP-209ENST00000557342 ZNF408Q9H9D4 720 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 AKAP11Q9UKA4 1901 aa15.35■□□□□ 0.05
SLIRP-209ENST00000557342 CEP350Q5VT06 3117 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms