RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
RIPK3-205ENST00000557253 OTUD7BQ6GQQ9 843 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 CERS5Q8N5B7 392 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 CD209Q9NNX6 404 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 JAG2Q9Y219 1238 aa12.39□□□□□ -0.43
RIPK3-205ENST00000557253 PI4KAP2A4QPH2 592 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 IREB2P48200 963 aaKnown RBP12.38□□□□□ -0.43
RIPK3-205ENST00000557253 SUPT20HL1Q3ZLR7 823 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 CFAP100Q494V2 611 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 PI4KAP1Q8N8J0 262 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
RIPK3-205ENST00000557253 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 ANKRD2Q9GZV1 360 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 PTCH2Q9Y6C5 1203 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 ECM29Q5VYK3 1845 aa12.38□□□□□ -0.43
RIPK3-205ENST00000557253 MYO1BO43795 1136 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 TAF5LO75529 589 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 ITGA6P23229 1130 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 RBM5P52756 815 aaKnown RBP eCLIP12.37□□□□□ -0.43
RIPK3-205ENST00000557253 CHRNDQ07001 517 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 SLC4A8Q2Y0W8 1093 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 SLC9C1Q4G0N8 1177 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 OPTNQ96CV9 577 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 PPP2R3BQ9Y5P8 575 aa12.37□□□□□ -0.43
RIPK3-205ENST00000557253 TESPA1A2RU30 521 aaPredicted RBP12.36□□□□□ -0.43
RIPK3-205ENST00000557253 SPDYE2BA6NHP3 402 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 H0YGN5 161 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 SPDYE6P0CI01 402 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 GNAI1P63096 354 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 RASA3Q14644 834 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 CCDC30Q5VVM6 783 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 TSPYL6Q8N831 410 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
RIPK3-205ENST00000557253 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 IFT57Q9NWB7 429 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 OTOFQ9HC10 1997 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
RIPK3-205ENST00000557253 SZT2Q5T011 3432 aa12.36□□□□□ -0.43
RIPK3-205ENST00000557253 UNCXA6NJT0 531 aa12.35□□□□□ -0.43
RIPK3-205ENST00000557253 H7C1W4 665 aa12.35□□□□□ -0.43
RIPK3-205ENST00000557253 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
RIPK3-205ENST00000557253 SH3TC2Q8TF17 1288 aa12.35□□□□□ -0.43
RIPK3-205ENST00000557253 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
RIPK3-205ENST00000557253 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
RIPK3-205ENST00000557253 ZSWIM8A7E2V4 1837 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 APAF1O14727 1248 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 TAF1CQ15572 869 aaPredicted RBP12.34□□□□□ -0.43
RIPK3-205ENST00000557253 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 G2E3Q7L622 706 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 CDAN1Q8IWY9 1227 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 BRI3BPQ8WY22 251 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 ZFYVE28Q9HCC9 887 aa12.34□□□□□ -0.43
RIPK3-205ENST00000557253 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
RIPK3-205ENST00000557253 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
RIPK3-205ENST00000557253 CCL15Q16663 113 aa12.33□□□□□ -0.44
RIPK3-205ENST00000557253 FAM43AQ8N2R8 423 aa12.33□□□□□ -0.44
RIPK3-205ENST00000557253 ANKRD18BA2A2Z9 1011 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 PLIN1O60240 522 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 CSF1RP07333 972 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 IL1R1P14778 569 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 GCKRQ14397 625 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.32□□□□□ -0.44
RIPK3-205ENST00000557253 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 PLA2G12BQ9BX93 195 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 TDRD3Q9H7E2 651 aaKnown RBP12.32□□□□□ -0.44
RIPK3-205ENST00000557253 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
RIPK3-205ENST00000557253 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
RIPK3-205ENST00000557253 TCP10L2B9ZVM9 353 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 GTF2A2P52657 109 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 CASP7P55210 303 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 CALD1Q05682 793 aaKnown RBP12.31□□□□□ -0.44
RIPK3-205ENST00000557253 VGLL4Q14135 290 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 DPF3Q92784 378 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 TSR2Q969E8 191 aaKnown RBP12.31□□□□□ -0.44
RIPK3-205ENST00000557253 STK31Q9BXU1 1019 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
RIPK3-205ENST00000557253 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
RIPK3-205ENST00000557253 FKBP1AP62942 108 aaKnown RBP12.3□□□□□ -0.44
RIPK3-205ENST00000557253 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
RIPK3-205ENST00000557253 MTFR1Q15390 333 aa12.3□□□□□ -0.44
RIPK3-205ENST00000557253 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
RIPK3-205ENST00000557253 C15orf52Q6ZUT6 534 aaKnown RBP12.3□□□□□ -0.44
RIPK3-205ENST00000557253 TEPSINQ96N21 525 aa12.3□□□□□ -0.44
RIPK3-205ENST00000557253 TMEM39BQ9GZU3 492 aa12.3□□□□□ -0.44
RIPK3-205ENST00000557253 TTF2Q9UNY4 1162 aaKnown RBP12.3□□□□□ -0.44
RIPK3-205ENST00000557253 KIAA0100Q14667 2235 aaKnown RBP12.29□□□□□ -0.44
RIPK3-205ENST00000557253 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
RIPK3-205ENST00000557253 TNFAIP1Q13829 316 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms