RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 THEGQ9P2T0 379 aa16.44■□□□□ 0.22
ABCD4-226ENST00000556971 ADGRA2Q96PE1 1338 aa16.44■□□□□ 0.22
ABCD4-226ENST00000556971 ZDBF2Q9HCK1 2354 aa16.43■□□□□ 0.22
ABCD4-226ENST00000556971 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
ABCD4-226ENST00000556971 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
ABCD4-226ENST00000556971 MXD3Q9BW11 206 aa16.43■□□□□ 0.22
ABCD4-226ENST00000556971 DEFB129Q9H1M3 183 aa16.43■□□□□ 0.22
ABCD4-226ENST00000556971 EPHX3Q9H6B9 360 aa16.43■□□□□ 0.22
ABCD4-226ENST00000556971 UNCXA6NJT0 531 aa16.42■□□□□ 0.22
ABCD4-226ENST00000556971 ANKRD13AQ8IZ07 590 aa16.42■□□□□ 0.22
ABCD4-226ENST00000556971 PAK6Q9NQU5 681 aaPredicted RBP16.42■□□□□ 0.22
ABCD4-226ENST00000556971 CPA4Q9UI42 421 aa16.42■□□□□ 0.22
ABCD4-226ENST00000556971 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 ELNP15502 786 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 CAPN2P17655 700 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 GTF2A2P52657 109 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 OGFOD1Q8N543 542 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 PPM1EQ8WY54 764 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 CELF1Q92879 486 aaKnown RBP16.41■□□□□ 0.22
ABCD4-226ENST00000556971 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
ABCD4-226ENST00000556971 GNAT3A8MTJ3 354 aa16.4■□□□□ 0.22
ABCD4-226ENST00000556971 PODNQ7Z5L7 613 aa16.4■□□□□ 0.22
ABCD4-226ENST00000556971 C11orf49Q9H6J7 331 aa16.4■□□□□ 0.22
ABCD4-226ENST00000556971 UFL1O94874 794 aa16.39■□□□□ 0.21
ABCD4-226ENST00000556971 MRPS5P82675 430 aaKnown RBP16.39■□□□□ 0.21
ABCD4-226ENST00000556971 GABRQQ9UN88 632 aa16.39■□□□□ 0.21
ABCD4-226ENST00000556971 ADCY3O60266 1144 aa16.38■□□□□ 0.21
ABCD4-226ENST00000556971 USP2O75604 605 aaPredicted RBP16.38■□□□□ 0.21
ABCD4-226ENST00000556971 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
ABCD4-226ENST00000556971 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
ABCD4-226ENST00000556971 FAM86C2PA6NEL3 165 aa16.37■□□□□ 0.21
ABCD4-226ENST00000556971 BTBD19C9JJ37 291 aa16.37■□□□□ 0.21
ABCD4-226ENST00000556971 GIGYF2Q6Y7W6 1299 aaKnown RBP16.37■□□□□ 0.21
ABCD4-226ENST00000556971 ANKLE1Q8NAG6 615 aa16.37■□□□□ 0.21
ABCD4-226ENST00000556971 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-226ENST00000556971 CACNA1BQ00975 2339 aa16.37■□□□□ 0.21
ABCD4-226ENST00000556971 MGAMO43451 1857 aa16.37■□□□□ 0.21
ABCD4-226ENST00000556971 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
ABCD4-226ENST00000556971 NBPF12Q5TAG4 269 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-226ENST00000556971 FBXW7Q969H0 707 aa16.36■□□□□ 0.21
ABCD4-226ENST00000556971 LBHD1Q9BQE6 289 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-226ENST00000556971 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.35■□□□□ 0.219e-6■■□□□ 13.2
ABCD4-226ENST00000556971 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
ABCD4-226ENST00000556971 PFASO15067 1338 aa16.35■□□□□ 0.21
ABCD4-226ENST00000556971 MYL6BP14649 208 aa16.34■□□□□ 0.21
ABCD4-226ENST00000556971 GRIN2CQ14957 1233 aa16.34■□□□□ 0.21
ABCD4-226ENST00000556971 SUPT20HL1Q3ZLR7 823 aa16.34■□□□□ 0.21
ABCD4-226ENST00000556971 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
ABCD4-226ENST00000556971 PPP2R3BQ9Y5P8 575 aa16.34■□□□□ 0.21
ABCD4-226ENST00000556971 FCGRTP55899 365 aa16.33■□□□□ 0.2
ABCD4-226ENST00000556971 SMAD3P84022 425 aaKnown RBP16.33■□□□□ 0.2
ABCD4-226ENST00000556971 NHLH1Q02575 133 aa16.33■□□□□ 0.2
ABCD4-226ENST00000556971 ZCCHC17Q9NP64 241 aaKnown RBP16.33■□□□□ 0.2
ABCD4-226ENST00000556971 GGA1Q9UJY5 639 aa16.33■□□□□ 0.2
ABCD4-226ENST00000556971 SHHQ15465 462 aa16.32■□□□□ 0.2
ABCD4-226ENST00000556971 DACT2Q5SW24 774 aa16.32■□□□□ 0.2
ABCD4-226ENST00000556971 ZBED3Q96IU2 234 aaPredicted RBP16.32■□□□□ 0.2
ABCD4-226ENST00000556971 ANKIB1Q9P2G1 1089 aa16.32■□□□□ 0.2
ABCD4-226ENST00000556971 PKD1L2Q7Z442 2459 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 ECM29Q5VYK3 1845 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 CETPP11597 493 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 VGLL4Q14135 290 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 POTEEQ6S8J3 1075 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.31■□□□□ 0.2
ABCD4-226ENST00000556971 ZBTB38Q8NAP3 1195 aaPredicted RBP16.31■□□□□ 0.2
ABCD4-226ENST00000556971 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 TAOK2Q9UL54 1235 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 MYO9BQ13459 2157 aa16.31■□□□□ 0.2
ABCD4-226ENST00000556971 ZNF804BA4D1E1 1349 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 FLT3LGP49771 235 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 FOXK2Q01167 660 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
ABCD4-226ENST00000556971 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
ABCD4-226ENST00000556971 MYO3BQ8WXR4 1341 aa16.29■□□□□ 0.2
ABCD4-226ENST00000556971 GPR37L1O60883 481 aa16.29■□□□□ 0.2
ABCD4-226ENST00000556971 KIAA0825Q8IV33 1275 aa16.29■□□□□ 0.2
ABCD4-226ENST00000556971 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
ABCD4-226ENST00000556971 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
ABCD4-226ENST00000556971 CLRN2A0PK11 232 aa16.28■□□□□ 0.2
ABCD4-226ENST00000556971 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
ABCD4-226ENST00000556971 COL3A1P02461 1466 aaPredicted RBP16.28■□□□□ 0.2
ABCD4-226ENST00000556971 NLRP10Q86W26 655 aa16.27■□□□□ 0.2
ABCD4-226ENST00000556971 VEZTQ9HBM0 779 aa16.27■□□□□ 0.2
ABCD4-226ENST00000556971 MORC1Q86VD1 984 aa16.26■□□□□ 0.19
ABCD4-226ENST00000556971 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
ABCD4-226ENST00000556971 MAST2Q6P0Q8 1798 aa16.26■□□□□ 0.19
ABCD4-226ENST00000556971 SMIM22K7EJ46 135 aa16.25■□□□□ 0.19
ABCD4-226ENST00000556971 BMP1P13497 986 aa16.25■□□□□ 0.19
ABCD4-226ENST00000556971 SNAPC2Q13487 334 aa16.25■□□□□ 0.19
ABCD4-226ENST00000556971 CCDC85BQ15834 202 aaPredicted RBP16.25■□□□□ 0.19
ABCD4-226ENST00000556971 CSADQ9Y600 493 aa16.25■□□□□ 0.19
ABCD4-226ENST00000556971 CFAP54Q96N23 3096 aa16.24■□□□□ 0.19
ABCD4-226ENST00000556971 SPDYE5A6NIY4 337 aa16.24■□□□□ 0.19
ABCD4-226ENST00000556971 PDE3AQ14432 1141 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms