RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 SHISA5Q8N114 240 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 GIMAP7Q8NHV1 300 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 USP26Q9BXU7 913 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 SOX13Q9UN79 622 aa6.89□□□□□ -1.31
LINC00871-203ENST00000556869 CES1P23141 567 aa6.88□□□□□ -1.31
LINC00871-203ENST00000556869 TMEM164Q5U3C3 297 aa6.88□□□□□ -1.31
LINC00871-203ENST00000556869 NUTM2GQ5VZR2 741 aa6.88□□□□□ -1.31
LINC00871-203ENST00000556869 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
LINC00871-203ENST00000556869 CCDC39Q9UFE4 941 aa6.88□□□□□ -1.31
LINC00871-203ENST00000556869 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.87□□□□□ -1.31
LINC00871-203ENST00000556869 MEGF11A6BM72 1044 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 A6NHS1 94 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 FOSL1P15407 271 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 EDEM1Q92611 657 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 SEPT3Q9UH03 358 aa6.87□□□□□ -1.31
LINC00871-203ENST00000556869 JAG1P78504 1218 aa6.86□□□□□ -1.31
LINC00871-203ENST00000556869 NFKBIBQ15653 356 aa6.86□□□□□ -1.31
LINC00871-203ENST00000556869 NFXL1Q6ZNB6 911 aa6.86□□□□□ -1.31
LINC00871-203ENST00000556869 VSIG10LQ86VR7 867 aa6.86□□□□□ -1.31
LINC00871-203ENST00000556869 TMPRSS13Q9BYE2 586 aa6.86□□□□□ -1.31
LINC00871-203ENST00000556869 LOC100289279A0A1B0GTE1 492 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 SOX1O00570 391 aaPredicted RBP6.85□□□□□ -1.31
LINC00871-203ENST00000556869 TIAF1O95411 115 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 DNM1Q05193 864 aaKnown RBP6.85□□□□□ -1.31
LINC00871-203ENST00000556869 IKBKEQ14164 716 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 C8orf34Q49A92 452 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 TP53INP2Q8IXH6 220 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 FBLIM1Q8WUP2 373 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 CYP4F12Q9HCS2 524 aa6.85□□□□□ -1.31
LINC00871-203ENST00000556869 DLGAP3O95886 979 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 PRNPP04156 253 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 DRD2P14416 443 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 PAOXQ6QHF9 649 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 VN1R5Q7Z5H4 357 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 TMEM102Q8N9M5 508 aaPredicted RBP6.84□□□□□ -1.31
LINC00871-203ENST00000556869 SMG8Q8ND04 991 aaKnown RBP6.84□□□□□ -1.31
LINC00871-203ENST00000556869 CLP1Q92989 425 aaKnown RBP6.84□□□□□ -1.31
LINC00871-203ENST00000556869 CHRDQ9H2X0 955 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 SUGCTQ9HAC7 445 aa6.84□□□□□ -1.31
LINC00871-203ENST00000556869 CYP26A1O43174 497 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 ADMP35318 185 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 USP11P51784 963 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 CPSF6Q16630 551 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00871-203ENST00000556869 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 XKR5Q6UX68 686 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 CBLL1Q75N03 491 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 BSNDQ8WZ55 320 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 NXPE3Q969Y0 559 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 OSMRQ99650 979 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 METTL22Q9BUU2 404 aaPredicted RBP6.83□□□□□ -1.32
LINC00871-203ENST00000556869 KRTAP4-9Q9BYQ8 210 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 SLAIN2Q9P270 581 aa6.83□□□□□ -1.32
LINC00871-203ENST00000556869 ATG7O95352 703 aa6.82□□□□□ -1.32
LINC00871-203ENST00000556869 PDGFAP04085 211 aa6.82□□□□□ -1.32
LINC00871-203ENST00000556869 RPLP1P05386 114 aaKnown RBP6.82□□□□□ -1.32
LINC00871-203ENST00000556869 TTC16Q8NEE8 873 aa6.82□□□□□ -1.32
LINC00871-203ENST00000556869 ASAP3Q8TDY4 903 aa6.82□□□□□ -1.32
LINC00871-203ENST00000556869 EREGO14944 169 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 C8AP07357 584 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 PCSK2P16519 638 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 SRPK2P78362 688 aaKnown RBP6.81□□□□□ -1.32
LINC00871-203ENST00000556869 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 C2CD4AQ8NCU7 369 aaPredicted RBP6.81□□□□□ -1.32
LINC00871-203ENST00000556869 FLCNQ8NFG4 579 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 ASIC4Q96FT7 647 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 PRKAG2Q9UGJ0 569 aa6.81□□□□□ -1.32
LINC00871-203ENST00000556869 FAM170BA6NMN3 283 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 ITGB5P18084 799 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 GSTM4Q03013 218 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 ZAR1Q86SH2 424 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 PMEPA1Q969W9 287 aa6.8□□□□□ -1.32
LINC00871-203ENST00000556869 BSDC1Q9NW68 430 aaPredicted RBP6.8□□□□□ -1.32
LINC00871-203ENST00000556869 SOX4Q06945 474 aaPredicted RBP6.79□□□□□ -1.32
LINC00871-203ENST00000556869 NOM1Q5C9Z4 860 aaKnown RBP6.79□□□□□ -1.32
LINC00871-203ENST00000556869 EXOSC6Q5RKV6 272 aaKnown RBP6.79□□□□□ -1.32
LINC00871-203ENST00000556869 POU5F2Q8N7G0 328 aa6.79□□□□□ -1.32
LINC00871-203ENST00000556869 HELQQ8TDG4 1101 aa6.79□□□□□ -1.32
LINC00871-203ENST00000556869 YIPF2Q9BWQ6 316 aa6.79□□□□□ -1.32
LINC00871-203ENST00000556869 SOX17Q9H6I2 414 aaPredicted RBP6.79□□□□□ -1.32
LINC00871-203ENST00000556869 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
LINC00871-203ENST00000556869 PHACTR2O75167 634 aa6.78□□□□□ -1.32
LINC00871-203ENST00000556869 ESRRAP11474 423 aaPredicted RBP6.78□□□□□ -1.32
LINC00871-203ENST00000556869 RAB6AP20340 208 aa6.78□□□□□ -1.32
LINC00871-203ENST00000556869 MPSTP25325 297 aa6.78□□□□□ -1.32
LINC00871-203ENST00000556869 MZF1P28698 734 aaPredicted RBP6.78□□□□□ -1.32
LINC00871-203ENST00000556869 PAK6Q9NQU5 681 aaPredicted RBP6.78□□□□□ -1.32
LINC00871-203ENST00000556869 LATS2Q9NRM7 1088 aa6.78□□□□□ -1.32
LINC00871-203ENST00000556869 ADH5P11766 374 aa6.77□□□□□ -1.33
LINC00871-203ENST00000556869 EDN3P14138 238 aa6.77□□□□□ -1.33
LINC00871-203ENST00000556869 JUNBP17275 347 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms