RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 FRAT2O75474 233 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 IL1R1P14778 569 aa13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 GYG1P46976 350 aa13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 UBE4AQ14139 1066 aa13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 C15orf52Q6ZUT6 534 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 APOBEC3FQ8IUX4 373 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-205ENST00000556607 UBE2Q2LH0YL09 131 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 SLC10A3P09131 477 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 HIBADHP31937 336 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 FKBP1BP68106 108 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 UTYO14607 1347 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
SPTLC2-205ENST00000556607 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 TRPA1O75762 1119 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 LRRC24Q50LG9 513 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 VEZTQ9HBM0 779 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 IRS2Q9Y4H2 1338 aa13.27□□□□□ -0.29
SPTLC2-205ENST00000556607 CLRN2A0PK11 232 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 RASAL3Q86YV0 1011 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 KLHDC4Q8TBB5 520 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 USP44Q9H0E7 712 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 NOB1Q9ULX3 412 aaKnown RBP13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 IQSEC3Q9UPP2 1182 aaPredicted RBP13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 RIPOR2Q9Y4F9 1068 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 PCDHAC2Q9Y5I4 1007 aa13.26□□□□□ -0.29
SPTLC2-205ENST00000556607 CCDC85CA6NKD9 419 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 CHAF1AQ13111 956 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 RABL6Q3YEC7 729 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 MFSD14BQ5SR56 506 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 CSRNP1Q96S65 589 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 DEFB129Q9H1M3 183 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 RNF186Q9NXI6 227 aa13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-205ENST00000556607 MYH13Q9UKX3 1938 aa13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 DGKZQ13574 1117 aa13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 TDRD7Q8NHU6 1098 aaKnown RBP13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 FAM84BQ96KN1 310 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 PRMT6Q96LA8 375 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-205ENST00000556607 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 PDE8BO95263 885 aa13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 IFIT1P09914 478 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 SAGE1Q9NXZ1 904 aa13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 FZD1Q9UP38 647 aa13.23□□□□□ -0.29
SPTLC2-205ENST00000556607 FAM205AQ6ZU69 1335 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 PPP1R12BO60237 982 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 PTPN12Q05209 780 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 SUPT20HL1Q3ZLR7 823 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 MCOLN1Q9GZU1 580 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 SIL1Q9H173 461 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 TDRD3Q9H7E2 651 aaKnown RBP13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 HDAC5Q9UQL6 1122 aa13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 COL1A1P02452 1464 aaPredicted RBP13.22□□□□□ -0.29
SPTLC2-205ENST00000556607 BCAMP50895 628 aa13.21□□□□□ -0.29
SPTLC2-205ENST00000556607 PUM3Q15397 648 aaKnown RBP13.21□□□□□ -0.29
SPTLC2-205ENST00000556607 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
SPTLC2-205ENST00000556607 PPP2R3BQ9Y5P8 575 aa13.21□□□□□ -0.29
SPTLC2-205ENST00000556607 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 EYA2O00167 538 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 SLC5A1P13866 664 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 CRKP46108 304 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 TNFAIP1Q13829 316 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 ZNF70Q9UC06 446 aaPredicted RBP13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 SERPINA10Q9UK55 444 aa13.2□□□□□ -0.3
SPTLC2-205ENST00000556607 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 IREB2P48200 963 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 TNNI2P48788 182 aa13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 RARSP54136 660 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 SREBF2Q12772 1141 aa13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 RASA3Q14644 834 aa13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 NBPF12Q5TAG4 269 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 VGLL2Q8N8G2 317 aa13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 LRRFIP2Q9Y608 721 aaKnown RBP13.19□□□□□ -0.3
SPTLC2-205ENST00000556607 AOX1Q06278 1338 aa13.18□□□□□ -0.3
SPTLC2-205ENST00000556607 KIF16BQ96L93 1317 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms