RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 F8W031 263 aaPredicted RBP28.48■■■□□ 2.15
ACTN1-220ENST00000556433 BICC1Q9H694 974 aaKnown RBP28.48■■■□□ 2.15
ACTN1-220ENST00000556433 RNF186Q9NXI6 227 aa28.48■■■□□ 2.15
ACTN1-220ENST00000556433 SAGE1Q9NXZ1 904 aa28.48■■■□□ 2.15
ACTN1-220ENST00000556433 JAG2Q9Y219 1238 aa28.48■■■□□ 2.15
ACTN1-220ENST00000556433 TRPA1O75762 1119 aa28.47■■■□□ 2.15
ACTN1-220ENST00000556433 FKBP1AP62942 108 aaKnown RBP28.47■■■□□ 2.15
ACTN1-220ENST00000556433 UBE4AQ14139 1066 aa28.47■■■□□ 2.15
ACTN1-220ENST00000556433 CDCA7LQ96GN5 454 aa28.47■■■□□ 2.15
ACTN1-220ENST00000556433 REM2Q8IYK8 340 aaPredicted RBP28.46■■■□□ 2.15
ACTN1-220ENST00000556433 MTMR14Q8NCE2 650 aa28.46■■■□□ 2.15
ACTN1-220ENST00000556433 RIPOR2Q9Y4F9 1068 aa28.46■■■□□ 2.15
ACTN1-220ENST00000556433 PAPPA2Q9BXP8 1791 aa28.46■■■□□ 2.15
ACTN1-220ENST00000556433 CASP8AP2Q9UKL3 1982 aa28.46■■■□□ 2.15
ACTN1-220ENST00000556433 RABL6Q3YEC7 729 aaPredicted RBP28.45■■■□□ 2.14
ACTN1-220ENST00000556433 HIBADHP31937 336 aaKnown RBP28.44■■■□□ 2.14
ACTN1-220ENST00000556433 GYG1P46976 350 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 PRKG1Q13976 671 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 CFAP100Q494V2 611 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 ANKRD44Q8N8A2 993 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 MCOLN1Q9GZU1 580 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 PCDHAC2Q9Y5I4 1007 aa28.44■■■□□ 2.14
ACTN1-220ENST00000556433 CCDC85CA6NKD9 419 aa28.43■■■□□ 2.14
ACTN1-220ENST00000556433 ARMC9Q7Z3E5 817 aa28.43■■■□□ 2.14
ACTN1-220ENST00000556433 TDRD7Q8NHU6 1098 aaKnown RBP28.43■■■□□ 2.14
ACTN1-220ENST00000556433 FAM84BQ96KN1 310 aaPredicted RBP28.43■■■□□ 2.14
ACTN1-220ENST00000556433 DEFB129Q9H1M3 183 aa28.43■■■□□ 2.14
ACTN1-220ENST00000556433 MROH5Q6ZUA9 1318 aa28.43■■■□□ 2.14
ACTN1-220ENST00000556433 DGKZQ13574 1117 aa28.42■■■□□ 2.14
ACTN1-220ENST00000556433 ALDH1L2Q3SY69 923 aa28.42■■■□□ 2.14
ACTN1-220ENST00000556433 PRMT6Q96LA8 375 aaPredicted RBP28.42■■■□□ 2.14
ACTN1-220ENST00000556433 USP44Q9H0E7 712 aa28.42■■■□□ 2.14
ACTN1-220ENST00000556433 A0A1B0GUL6 1792 aa28.42■■■□□ 2.14
ACTN1-220ENST00000556433 FAM205AQ6ZU69 1335 aa28.42■■■□□ 2.14
ACTN1-220ENST00000556433 MYO1BO43795 1136 aa28.41■■■□□ 2.14
ACTN1-220ENST00000556433 LRRC24Q50LG9 513 aa28.41■■■□□ 2.14
ACTN1-220ENST00000556433 SPDYE2BA6NHP3 402 aa28.4■■■□□ 2.14
ACTN1-220ENST00000556433 SPDYE6P0CI01 402 aa28.4■■■□□ 2.14
ACTN1-220ENST00000556433 RBM5P52756 815 aaKnown RBP eCLIP28.4■■■□□ 2.14
ACTN1-220ENST00000556433 METTL24Q5JXM2 366 aa28.4■■■□□ 2.14
ACTN1-220ENST00000556433 SMC4Q9NTJ3 1288 aa28.4■■■□□ 2.14
ACTN1-220ENST00000556433 CLRN2A0PK11 232 aa28.39■■■□□ 2.14
ACTN1-220ENST00000556433 PTPN12Q05209 780 aaKnown RBP28.39■■■□□ 2.14
ACTN1-220ENST00000556433 MFSD14BQ5SR56 506 aa28.39■■■□□ 2.14
ACTN1-220ENST00000556433 TRMT2AQ8IZ69 625 aaKnown RBP28.39■■■□□ 2.14
ACTN1-220ENST00000556433 ANGEL1Q9UNK9 670 aaKnown RBP28.39■■■□□ 2.14
ACTN1-220ENST00000556433 VPS37DQ86XT2 251 aa28.37■■■□□ 2.13
ACTN1-220ENST00000556433 KLHDC4Q8TBB5 520 aa28.37■■■□□ 2.13
ACTN1-220ENST00000556433 VEZTQ9HBM0 779 aa28.37■■■□□ 2.13
ACTN1-220ENST00000556433 PPP2R3BQ9Y5P8 575 aa28.37■■■□□ 2.13
ACTN1-220ENST00000556433 MKRN3Q13064 507 aaKnown RBP28.36■■■□□ 2.13
ACTN1-220ENST00000556433 LDLRAD1Q5T700 205 aa28.36■■■□□ 2.13
ACTN1-220ENST00000556433 FBXO33Q7Z6M2 555 aa28.36■■■□□ 2.13
ACTN1-220ENST00000556433 TTF2Q9UNY4 1162 aaKnown RBP28.36■■■□□ 2.13
ACTN1-220ENST00000556433 FZD1Q9UP38 647 aa28.36■■■□□ 2.13
ACTN1-220ENST00000556433 AKAP11Q9UKA4 1901 aa28.35■■■□□ 2.13
ACTN1-220ENST00000556433 PDE8BO95263 885 aa28.35■■■□□ 2.13
ACTN1-220ENST00000556433 AOX1Q06278 1338 aa28.35■■■□□ 2.13
ACTN1-220ENST00000556433 COL1A1P02452 1464 aaPredicted RBP28.34■■■□□ 2.13
ACTN1-220ENST00000556433 CCER2I3L3R5 266 aa28.34■■■□□ 2.13
ACTN1-220ENST00000556433 TM4SF4P48230 202 aa28.34■■■□□ 2.13
ACTN1-220ENST00000556433 CAVIN4Q5BKX8 364 aa28.34■■■□□ 2.13
ACTN1-220ENST00000556433 IQSEC3Q9UPP2 1182 aaPredicted RBP28.34■■■□□ 2.13
ACTN1-220ENST00000556433 SUPT20HL1Q3ZLR7 823 aa28.33■■■□□ 2.13
ACTN1-220ENST00000556433 VGLL2Q8N8G2 317 aa28.33■■■□□ 2.13
ACTN1-220ENST00000556433 SERPINA10Q9UK55 444 aa28.33■■■□□ 2.13
ACTN1-220ENST00000556433 PPP1R12BO60237 982 aaPredicted RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 FRAT2O75474 233 aaPredicted RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 CT47B1P0C2W7 299 aaPredicted RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 CHAF1AQ13111 956 aaPredicted RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 NOB1Q9ULX3 412 aaKnown RBP28.32■■■□□ 2.12
ACTN1-220ENST00000556433 TBC1D8O95759 1140 aa28.31■■■□□ 2.12
ACTN1-220ENST00000556433 RASA3Q14644 834 aa28.31■■■□□ 2.12
ACTN1-220ENST00000556433 MAP3K11Q16584 847 aa28.31■■■□□ 2.12
ACTN1-220ENST00000556433 NBPF12Q5TAG4 269 aaPredicted RBP28.31■■■□□ 2.12
ACTN1-220ENST00000556433 SLC10A4Q96EP9 437 aa28.31■■■□□ 2.12
ACTN1-220ENST00000556433 SREBF2Q12772 1141 aa28.3■■■□□ 2.12
ACTN1-220ENST00000556433 SPRYD7Q5W111 196 aa28.3■■■□□ 2.12
ACTN1-220ENST00000556433 TDRD3Q9H7E2 651 aaKnown RBP28.3■■■□□ 2.12
ACTN1-220ENST00000556433 ZNF70Q9UC06 446 aaPredicted RBP28.3■■■□□ 2.12
ACTN1-220ENST00000556433 EYA2O00167 538 aa28.29■■■□□ 2.12
ACTN1-220ENST00000556433 RFX5P48382 616 aaPredicted RBP28.29■■■□□ 2.12
ACTN1-220ENST00000556433 BCAMP50895 628 aa28.29■■■□□ 2.12
ACTN1-220ENST00000556433 SPDYE2Q495Y8 402 aa28.29■■■□□ 2.12
ACTN1-220ENST00000556433 DZIP1LQ8IYY4 767 aaKnown RBP28.29■■■□□ 2.12
ACTN1-220ENST00000556433 IFIT1P09914 478 aaKnown RBP28.28■■■□□ 2.12
ACTN1-220ENST00000556433 CRKP46108 304 aa28.28■■■□□ 2.12
ACTN1-220ENST00000556433 GRIK5Q16478 980 aa28.28■■■□□ 2.12
ACTN1-220ENST00000556433 TBC1D22AQ8WUA7 517 aa28.28■■■□□ 2.12
ACTN1-220ENST00000556433 UBTFL1P0CB47 393 aaPredicted RBP28.27■■■□□ 2.12
ACTN1-220ENST00000556433 TNFAIP1Q13829 316 aa28.27■■■□□ 2.12
ACTN1-220ENST00000556433 PUM3Q15397 648 aaKnown RBP28.27■■■□□ 2.12
ACTN1-220ENST00000556433 CLMNQ96JQ2 1002 aa28.27■■■□□ 2.12
ACTN1-220ENST00000556433 API5Q9BZZ5 524 aaKnown RBP28.27■■■□□ 2.12
ACTN1-220ENST00000556433 SSC5DA1L4H1 1573 aa28.26■■■□□ 2.11
ACTN1-220ENST00000556433 FGFR2P21802 821 aa28.26■■■□□ 2.11
ACTN1-220ENST00000556433 CTU1Q7Z7A3 348 aaKnown RBP28.26■■■□□ 2.11
ACTN1-220ENST00000556433 UNCXA6NJT0 531 aa28.25■■■□□ 2.11
ACTN1-220ENST00000556433 USP2O75604 605 aaPredicted RBP28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms