RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 ARID4AP29374 1257 aaPredicted RBP17.16■□□□□ 0.34
VIPAS39-208ENST00000556412 TNIP1Q15025 636 aa17.16■□□□□ 0.34
VIPAS39-208ENST00000556412 DENND2AQ9ULE3 1009 aa17.16■□□□□ 0.34
VIPAS39-208ENST00000556412 SEMA3EO15041 775 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 MCAMP43121 646 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 HMG20BQ9P0W2 317 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
VIPAS39-208ENST00000556412 DDNO94850 711 aaPredicted RBP17.14■□□□□ 0.34
VIPAS39-208ENST00000556412 STRIP1Q5VSL9 837 aa17.14■□□□□ 0.34
VIPAS39-208ENST00000556412 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.34
VIPAS39-208ENST00000556412 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
VIPAS39-208ENST00000556412 COL1A1P02452 1464 aaPredicted RBP17.14■□□□□ 0.33
VIPAS39-208ENST00000556412 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
VIPAS39-208ENST00000556412 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
VIPAS39-208ENST00000556412 SKAP1Q86WV1 359 aa17.14■□□□□ 0.33
VIPAS39-208ENST00000556412 ATP5JP18859 108 aa17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 PDE4AP27815 886 aa17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 ZAP70P43403 619 aa17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 GPC2Q8N158 579 aa17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 ZNF512BQ96KM6 892 aaPredicted RBP17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
VIPAS39-208ENST00000556412 F8W031 263 aaPredicted RBP17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 PDE1AP54750 535 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 WDR66Q8TBY9 1149 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 TTC41PQ6P2S7 1318 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 ERC2O15083 957 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 TBC1D22AQ8WUA7 517 aa17.12■□□□□ 0.33
VIPAS39-208ENST00000556412 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 KIAA0825Q8IV33 1275 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 CERS5Q8N5B7 392 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 SALL3Q9BXA9 1300 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 ARAP2Q8WZ64 1704 aa17.11■□□□□ 0.33
VIPAS39-208ENST00000556412 GOLIM4O00461 696 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 MAP4K4O95819 1239 aaPredicted RBP17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 RGS3P49796 1198 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 PI4K2BQ8TCG2 481 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
VIPAS39-208ENST00000556412 PDS5AQ29RF7 1337 aaKnown RBP17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 CYP2E1P05181 493 aaPredicted RBP17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 PRDX5P30044 214 aa17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 GRIK5Q16478 980 aa17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 ZGPATQ8N5A5 531 aaKnown RBP17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 HAUS7Q99871 368 aa17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
VIPAS39-208ENST00000556412 LDHBP07195 334 aaKnown RBP17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 RPS12P25398 132 aaKnown RBP17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 LMOD1P29536 600 aaPredicted RBP17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 AGBL3Q8NEM8 1001 aa17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 PIH1D3Q9NQM4 214 aaKnown RBP17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 RAI14Q9P0K7 980 aa17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 TTF2Q9UNY4 1162 aaKnown RBP17.08■□□□□ 0.33
VIPAS39-208ENST00000556412 IDH1O75874 414 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 YY1P25490 414 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 SCNN1DP51172 638 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 MICALL2Q8IY33 904 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 FKBP1AP62942 108 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 DZIP1Q86YF9 867 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
VIPAS39-208ENST00000556412 SBF1O95248 1867 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 AOX1Q06278 1338 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 ZBTB22O15209 634 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 TTF1Q15361 905 aaPredicted RBP17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 RBM26Q5T8P6 1007 aaKnown RBP17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 GMLQ99445 158 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
VIPAS39-208ENST00000556412 EPS15P42566 896 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 RBM5P52756 815 aaKnown RBP eCLIP17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 DPF2Q92785 391 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 H7C1D1 291 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 L3MBTL3Q96JM7 780 aaPredicted RBP17.05■□□□□ 0.32
VIPAS39-208ENST00000556412 DIXDC1Q155Q3 683 aa17.04■□□□□ 0.32
VIPAS39-208ENST00000556412 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms