RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 GPC2Q8N158 579 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 VGLL2Q8N8G2 317 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 DBNDD1Q9H9R9 158 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 COPRSQ9NQ92 184 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 KCNQ5Q9NR82 932 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 TIAM2Q8IVF5 1701 aa12.06□□□□□ -0.48
SRP54-210ENST00000556380 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
SRP54-210ENST00000556380 EYA2O00167 538 aa12.05□□□□□ -0.48
SRP54-210ENST00000556380 RAD17O75943 681 aa12.05□□□□□ -0.48
SRP54-210ENST00000556380 VEGFAP15692 232 aaPredicted RBP12.05□□□□□ -0.48
SRP54-210ENST00000556380 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
SRP54-210ENST00000556380 MROH5Q6ZUA9 1318 aa12.05□□□□□ -0.48
SRP54-210ENST00000556380 PNMA6EA0A0J9YXQ4 647 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 ECE2O60344 883 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 CIAO1O76071 339 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 UBE4AQ14139 1066 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 MVPQ14764 893 aaKnown RBP12.04□□□□□ -0.48
SRP54-210ENST00000556380 CIAPIN1Q6FI81 312 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
SRP54-210ENST00000556380 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
SRP54-210ENST00000556380 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 SCNN1DP51172 638 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 ATP8B2P98198 1209 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 TNIP1Q15025 636 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.03□□□□□ -0.48
SRP54-210ENST00000556380 SSH3Q8TE77 659 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 C1orf115Q9H7X2 142 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 GJA3Q9Y6H8 435 aa12.03□□□□□ -0.48
SRP54-210ENST00000556380 SPEF2Q9C093 1822 aa12.02□□□□□ -0.48
SRP54-210ENST00000556380 POTEB3A0JP26 581 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 PSMD14O00487 310 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 PDE8BO95263 885 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 VIL1P09327 827 aaKnown RBP12.02□□□□□ -0.49
SRP54-210ENST00000556380 FGFR2P21802 821 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 KCNJ4P48050 445 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 METTL24Q5JXM2 366 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 POTEBQ6S5H4 581 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 COA1Q9GZY4 146 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.49
SRP54-210ENST00000556380 DDX19BQ9UMR2 479 aa12.02□□□□□ -0.49
SRP54-210ENST00000556380 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
SRP54-210ENST00000556380 IL15P40933 162 aaPredicted RBP12.01□□□□□ -0.49
SRP54-210ENST00000556380 GMPSP49915 693 aaPredicted RBP12.01□□□□□ -0.49
SRP54-210ENST00000556380 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
SRP54-210ENST00000556380 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 FBXO33Q7Z6M2 555 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 DPF2Q92785 391 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 FAM84BQ96KN1 310 aaPredicted RBP12.01□□□□□ -0.49
SRP54-210ENST00000556380 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 GMLQ99445 158 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 SIL1Q9H173 461 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 CD209Q9NNX6 404 aa12.01□□□□□ -0.49
SRP54-210ENST00000556380 SCN9AQ15858 1988 aa12□□□□□ -0.49
SRP54-210ENST00000556380 IQCA1LA6NCM1 817 aa12□□□□□ -0.49
SRP54-210ENST00000556380 TOMM70O94826 608 aa12□□□□□ -0.49
SRP54-210ENST00000556380 IL1R1P14778 569 aa12□□□□□ -0.49
SRP54-210ENST00000556380 EPS15P42566 896 aa12□□□□□ -0.49
SRP54-210ENST00000556380 DACT2Q5SW24 774 aa12□□□□□ -0.49
SRP54-210ENST00000556380 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
SRP54-210ENST00000556380 GPRC5DQ9NZD1 345 aa12□□□□□ -0.49
SRP54-210ENST00000556380 HACL1Q9UJ83 578 aa12□□□□□ -0.49
SRP54-210ENST00000556380 NOP58Q9Y2X3 529 aaKnown RBP12□□□□□ -0.49
SRP54-210ENST00000556380 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
SRP54-210ENST00000556380 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 RPS12P25398 132 aaKnown RBP11.99□□□□□ -0.49
SRP54-210ENST00000556380 EPHX2P34913 555 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 GYG1P46976 350 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 C1QTNF8P60827 252 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 PUM3Q15397 648 aaKnown RBP11.99□□□□□ -0.49
SRP54-210ENST00000556380 STRIP1Q5VSL9 837 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
SRP54-210ENST00000556380 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 SIRT2Q8IXJ6 389 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
SRP54-210ENST00000556380 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 ZNF609O15014 1411 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 A0A1B0GUL6 1792 aa11.99□□□□□ -0.49
SRP54-210ENST00000556380 SHTN1A0MZ66 631 aa11.98□□□□□ -0.49
SRP54-210ENST00000556380 HIBADHP31937 336 aaKnown RBP11.98□□□□□ -0.49
SRP54-210ENST00000556380 LPIN2Q92539 896 aa11.98□□□□□ -0.49
SRP54-210ENST00000556380 CNOT7Q9UIV1 285 aaKnown RBP11.98□□□□□ -0.49
SRP54-210ENST00000556380 SASH1O94885 1247 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 HIRAP54198 1017 aaPredicted RBP11.97□□□□□ -0.49
SRP54-210ENST00000556380 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
SRP54-210ENST00000556380 TFCP2Q12800 502 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 TTLL5Q6EMB2 1281 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 ZNF804AQ7Z570 1209 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 RPAP2Q8IXW5 612 aaPredicted RBP11.97□□□□□ -0.49
SRP54-210ENST00000556380 AGBL3Q8NEM8 1001 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 MXD3Q9BW11 206 aa11.97□□□□□ -0.49
SRP54-210ENST00000556380 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
SRP54-210ENST00000556380 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
SRP54-210ENST00000556380 SCN4AP35499 1836 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms