RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 SLF2Q8IX21 1173 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 NLGN2Q8NFZ4 835 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 JDP2Q8WYK2 163 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 BACH2Q9BYV9 841 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 ABCF2Q9UG63 623 aa11.12□□□□□ -0.63
ACTN1-218ENST00000556343 IQSEC3Q9UPP2 1182 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-218ENST00000556343 IRS2Q9Y4H2 1338 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 WTIPA6NIX2 430 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-218ENST00000556343 IDH1O75874 414 aaKnown RBP11.11□□□□□ -0.63
ACTN1-218ENST00000556343 LDHCP07864 332 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 KLRK1P26718 216 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 IARSP41252 1262 aaKnown RBP11.11□□□□□ -0.63
ACTN1-218ENST00000556343 GSTO1P78417 241 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 SCARF1Q14162 830 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 DOK7Q18PE1 504 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 NIM1KQ8IY84 436 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 GPR101Q96P66 508 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-218ENST00000556343 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 SUGT1Q9Y2Z0 365 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
ACTN1-218ENST00000556343 RAD50Q92878 1312 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
ACTN1-218ENST00000556343 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
ACTN1-218ENST00000556343 UBE3CQ15386 1083 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 AOC3Q16853 763 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 MCMDC2Q4G0Z9 681 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 SLC9C2Q5TAH2 1124 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 CWC27Q6UX04 472 aaKnown RBP11.1□□□□□ -0.63
ACTN1-218ENST00000556343 ARHGAP27Q6ZUM4 889 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 EDC3Q96F86 508 aaKnown RBP11.1□□□□□ -0.63
ACTN1-218ENST00000556343 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
ACTN1-218ENST00000556343 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 NDUFB9Q9Y6M9 179 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 TAF1P21675 1872 aa11.1□□□□□ -0.63
ACTN1-218ENST00000556343 FAM205AQ6ZU69 1335 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 SPEF2Q9C093 1822 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 COL4A1P02462 1669 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 EPB41L2O43491 1005 aaKnown RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 ECE2O60344 883 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 MCCP23508 829 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 GTF2IP78347 998 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 STRIP1Q5VSL9 837 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 NAA16Q6N069 864 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 PI16Q6UXB8 463 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 DZIP1Q86YF9 867 aaKnown RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 CERS3Q8IU89 383 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 APPBP2Q92624 585 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 ESYT1Q9BSJ8 1104 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 DBNDD1Q9H9R9 158 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 PIH1D3Q9NQM4 214 aaKnown RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-218ENST00000556343 ZNRF3Q9ULT6 936 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 SLX4Q8IY92 1834 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 MAST3O60307 1309 aa11.09□□□□□ -0.63
ACTN1-218ENST00000556343 GRIN3BO60391 1043 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 BAG3O95817 575 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 ADD2P35612 726 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 MMP14P50281 582 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-218ENST00000556343 TNIP1Q15025 636 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 GPR162Q16538 588 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 ZMYM1Q5SVZ6 1142 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 MAGEB6Q8N7X4 407 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 MYO3BQ8WXR4 1341 aa11.08□□□□□ -0.64
ACTN1-218ENST00000556343 LRRC37AA6NMS7 1700 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 SGSM2O43147 1006 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 PDE6AP16499 860 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 CYP7A1P22680 504 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 EIF6P56537 245 aaKnown RBP11.07□□□□□ -0.64
ACTN1-218ENST00000556343 SLC51AQ86UW1 340 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 AIDAQ96BJ3 306 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
ACTN1-218ENST00000556343 DLEC1Q9Y238 1755 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 GNAT2P19087 354 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 LMNB1P20700 586 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 MRIQ9BWK5 157 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 HDAC9Q9UKV0 1011 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
ACTN1-218ENST00000556343 MAGEB6P1A0A0J9YX57 407 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 NFKBIEO00221 500 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 MECOMQ03112 1051 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 CIAPIN1Q6FI81 312 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
ACTN1-218ENST00000556343 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
ACTN1-218ENST00000556343 FAM227BQ96M60 508 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms