RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 UBE4AQ14139 1066 aa21.58■■□□□ 1.05
GPHN-211ENST00000556020 TTLL12Q14166 644 aaPredicted RBP21.58■■□□□ 1.05
GPHN-211ENST00000556020 METTL24Q5JXM2 366 aa21.58■■□□□ 1.05
GPHN-211ENST00000556020 MOB2Q70IA6 237 aa21.58■■□□□ 1.05
GPHN-211ENST00000556020 RIPOR2Q9Y4F9 1068 aa21.58■■□□□ 1.05
GPHN-211ENST00000556020 PAPPA2Q9BXP8 1791 aa21.58■■□□□ 1.04
GPHN-211ENST00000556020 FAM155AB1AL88 458 aaPredicted RBP21.57■■□□□ 1.04
GPHN-211ENST00000556020 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
GPHN-211ENST00000556020 HIBADHP31937 336 aaKnown RBP21.57■■□□□ 1.04
GPHN-211ENST00000556020 MMP14P50281 582 aa21.57■■□□□ 1.04
GPHN-211ENST00000556020 DLGAP5Q15398 846 aa21.57■■□□□ 1.04
GPHN-211ENST00000556020 CCDC102AQ96A19 550 aa21.57■■□□□ 1.04
GPHN-211ENST00000556020 PCDHAC2Q9Y5I4 1007 aa21.56■■□□□ 1.04
GPHN-211ENST00000556020 UBE2Q2LH0YL09 131 aa21.55■■□□□ 1.04
GPHN-211ENST00000556020 KIF23Q02241 960 aaPredicted RBP21.55■■□□□ 1.04
GPHN-211ENST00000556020 APOBEC3FQ8IUX4 373 aaKnown RBP21.55■■□□□ 1.04
GPHN-211ENST00000556020 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
GPHN-211ENST00000556020 FAM84BQ96KN1 310 aaPredicted RBP21.55■■□□□ 1.04
GPHN-211ENST00000556020 IQSEC3Q9UPP2 1182 aaPredicted RBP21.55■■□□□ 1.04
GPHN-211ENST00000556020 ECM29Q5VYK3 1845 aa21.55■■□□□ 1.04
GPHN-211ENST00000556020 NF2P35240 595 aa21.54■■□□□ 1.04
GPHN-211ENST00000556020 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
GPHN-211ENST00000556020 FKBP1BP68106 108 aa21.54■■□□□ 1.04
GPHN-211ENST00000556020 PRKG1Q13976 671 aa21.54■■□□□ 1.04
GPHN-211ENST00000556020 CFAP100Q494V2 611 aa21.54■■□□□ 1.04
GPHN-211ENST00000556020 VPS37DQ86XT2 251 aa21.54■■□□□ 1.04
GPHN-211ENST00000556020 TDRD7Q8NHU6 1098 aaKnown RBP21.54■■□□□ 1.04
GPHN-211ENST00000556020 API5Q9BZZ5 524 aaKnown RBP21.54■■□□□ 1.04
GPHN-211ENST00000556020 CA12O43570 354 aa21.53■■□□□ 1.04
GPHN-211ENST00000556020 SLC10A3P09131 477 aa21.53■■□□□ 1.04
GPHN-211ENST00000556020 UBTFL1P0CB47 393 aaPredicted RBP21.53■■□□□ 1.04
GPHN-211ENST00000556020 FKBP1AP62942 108 aaKnown RBP21.53■■□□□ 1.04
GPHN-211ENST00000556020 MFSD14BQ5SR56 506 aa21.53■■□□□ 1.04
GPHN-211ENST00000556020 CLRN2A0PK11 232 aa21.52■■□□□ 1.04
GPHN-211ENST00000556020 PDE8BO95263 885 aa21.52■■□□□ 1.04
GPHN-211ENST00000556020 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.04
GPHN-211ENST00000556020 CHAF1AQ13111 956 aaPredicted RBP21.52■■□□□ 1.04
GPHN-211ENST00000556020 RASAL3Q86YV0 1011 aa21.52■■□□□ 1.04
GPHN-211ENST00000556020 MIER1Q8N108 512 aa21.52■■□□□ 1.04
GPHN-211ENST00000556020 VEZTQ9HBM0 779 aa21.52■■□□□ 1.04
GPHN-211ENST00000556020 FAM205AQ6ZU69 1335 aa21.52■■□□□ 1.03
GPHN-211ENST00000556020 ARAP2Q8WZ64 1704 aa21.52■■□□□ 1.03
GPHN-211ENST00000556020 AKAP11Q9UKA4 1901 aa21.51■■□□□ 1.03
GPHN-211ENST00000556020 CASP8AP2Q9UKL3 1982 aa21.51■■□□□ 1.03
GPHN-211ENST00000556020 MYO1BO43795 1136 aa21.51■■□□□ 1.03
GPHN-211ENST00000556020 FRAT2O75474 233 aaPredicted RBP21.51■■□□□ 1.03
GPHN-211ENST00000556020 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.51■■□□□ 1.03
GPHN-211ENST00000556020 SPDYE2BA6NHP3 402 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 SPDYE6P0CI01 402 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 CAVIN4Q5BKX8 364 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 DIEXFQ68CQ4 756 aaKnown RBP21.5■■□□□ 1.03
GPHN-211ENST00000556020 VGLL2Q8N8G2 317 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 MTMR14Q8NCE2 650 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 PRMT6Q96LA8 375 aaPredicted RBP21.5■■□□□ 1.03
GPHN-211ENST00000556020 SIL1Q9H173 461 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 TTF2Q9UNY4 1162 aaKnown RBP21.5■■□□□ 1.03
GPHN-211ENST00000556020 AOX1Q06278 1338 aa21.5■■□□□ 1.03
GPHN-211ENST00000556020 EYA2O00167 538 aa21.49■■□□□ 1.03
GPHN-211ENST00000556020 RFX5P48382 616 aaPredicted RBP21.49■■□□□ 1.03
GPHN-211ENST00000556020 FBXO33Q7Z6M2 555 aa21.49■■□□□ 1.03
GPHN-211ENST00000556020 DEFB129Q9H1M3 183 aa21.49■■□□□ 1.03
GPHN-211ENST00000556020 FZD1Q9UP38 647 aa21.49■■□□□ 1.03
GPHN-211ENST00000556020 LRRFIP2Q9Y608 721 aaKnown RBP21.49■■□□□ 1.03
GPHN-211ENST00000556020 KIF16BQ96L93 1317 aa21.49■■□□□ 1.03
GPHN-211ENST00000556020 BCAMP50895 628 aa21.48■■□□□ 1.03
GPHN-211ENST00000556020 MKRN3Q13064 507 aaKnown RBP21.48■■□□□ 1.03
GPHN-211ENST00000556020 PUM3Q15397 648 aaKnown RBP21.48■■□□□ 1.03
GPHN-211ENST00000556020 COL1A1P02452 1464 aaPredicted RBP21.47■■□□□ 1.03
GPHN-211ENST00000556020 TRPA1O75762 1119 aa21.47■■□□□ 1.03
GPHN-211ENST00000556020 IFIT1P09914 478 aaKnown RBP21.47■■□□□ 1.03
GPHN-211ENST00000556020 HNRNPUQ00839 825 aaKnown RBP eCLIP21.47■■□□□ 1.03
GPHN-211ENST00000556020 PTPN12Q05209 780 aaKnown RBP21.47■■□□□ 1.03
GPHN-211ENST00000556020 ARMC9Q7Z3E5 817 aa21.47■■□□□ 1.03
GPHN-211ENST00000556020 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
GPHN-211ENST00000556020 MEIS3Q99687 375 aa21.47■■□□□ 1.03
GPHN-211ENST00000556020 ANGEL1Q9UNK9 670 aaKnown RBP21.47■■□□□ 1.03
GPHN-211ENST00000556020 MYH13Q9UKX3 1938 aa21.47■■□□□ 1.03
GPHN-211ENST00000556020 GRIK5Q16478 980 aa21.46■■□□□ 1.03
GPHN-211ENST00000556020 FRAT1Q92837 279 aaPredicted RBP21.46■■□□□ 1.03
GPHN-211ENST00000556020 RNF186Q9NXI6 227 aa21.46■■□□□ 1.03
GPHN-211ENST00000556020 SLC5A1P13866 664 aa21.45■■□□□ 1.02
GPHN-211ENST00000556020 ATG9AQ7Z3C6 839 aa21.45■■□□□ 1.02
GPHN-211ENST00000556020 BCAR3O75815 825 aa21.44■■□□□ 1.02
GPHN-211ENST00000556020 ABHD8Q96I13 439 aa21.44■■□□□ 1.02
GPHN-211ENST00000556020 TDRD3Q9H7E2 651 aaKnown RBP21.44■■□□□ 1.02
GPHN-211ENST00000556020 SERPINA10Q9UK55 444 aa21.44■■□□□ 1.02
GPHN-211ENST00000556020 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
GPHN-211ENST00000556020 HDAC5Q9UQL6 1122 aa21.44■■□□□ 1.02
GPHN-211ENST00000556020 FGFR2P21802 821 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 CRKP46108 304 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
GPHN-211ENST00000556020 TBC1D22AQ8WUA7 517 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 ARHGAP45Q92619 1136 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 SAGE1Q9NXZ1 904 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 ZNF70Q9UC06 446 aaPredicted RBP21.43■■□□□ 1.02
GPHN-211ENST00000556020 TNNQ9UQP3 1299 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 PPP2R3BQ9Y5P8 575 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 SSC5DA1L4H1 1573 aa21.43■■□□□ 1.02
GPHN-211ENST00000556020 IPO8O15397 1037 aaKnown RBP21.42■■□□□ 1.02
GPHN-211ENST00000556020 RASA3Q14644 834 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms