RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 PSMD14O00487 310 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
PSEN1-215ENST00000556011 AMPHP49418 695 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 SLAIN1Q8ND83 568 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 ALG13Q9NP73 1137 aaKnown RBP11.08□□□□□ -0.64
PSEN1-215ENST00000556011 SPG7Q9UQ90 795 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 KMT2EQ8IZD2 1858 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 COL4A3Q01955 1670 aa11.08□□□□□ -0.64
PSEN1-215ENST00000556011 TECTAO75443 2155 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
PSEN1-215ENST00000556011 ELNP15502 786 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 PHKG2P15735 406 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 HOXD10P28358 340 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 GJA5P36382 358 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
PSEN1-215ENST00000556011 GRIPAP1Q4V328 841 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 VPS33BQ9H267 617 aa11.07□□□□□ -0.64
PSEN1-215ENST00000556011 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
PSEN1-215ENST00000556011 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
PSEN1-215ENST00000556011 CFAP46Q8IYW2 2715 aa11.06□□□□□ -0.64
PSEN1-215ENST00000556011 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-215ENST00000556011 CYP19A1P11511 503 aaPredicted RBP11.06□□□□□ -0.64
PSEN1-215ENST00000556011 FBLN1P23142 703 aa11.06□□□□□ -0.64
PSEN1-215ENST00000556011 NF2P35240 595 aa11.06□□□□□ -0.64
PSEN1-215ENST00000556011 WASHC2AQ641Q2 1341 aa11.06□□□□□ -0.64
PSEN1-215ENST00000556011 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
PSEN1-215ENST00000556011 PRKCZQ05513 592 aa11.05□□□□□ -0.64
PSEN1-215ENST00000556011 RNPC3Q96LT9 517 aaKnown RBP11.05□□□□□ -0.64
PSEN1-215ENST00000556011 ERVV-2B6SEH9 535 aa11.04□□□□□ -0.64
PSEN1-215ENST00000556011 ADCY3O60266 1144 aa11.04□□□□□ -0.64
PSEN1-215ENST00000556011 COL9A3Q14050 684 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-215ENST00000556011 IFNL2Q8IZJ0 200 aa11.04□□□□□ -0.64
PSEN1-215ENST00000556011 HERVK_113Q902F9 699 aa11.04□□□□□ -0.64
PSEN1-215ENST00000556011 COG5Q9UP83 839 aa11.04□□□□□ -0.64
PSEN1-215ENST00000556011 H0Y858 1186 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 TLR2O60603 784 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 CANXP27824 592 aaKnown RBP11.03□□□□□ -0.64
PSEN1-215ENST00000556011 PRR23BQ6ZRT6 265 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 NBPF5PQ86XG9 351 aaPredicted RBP11.03□□□□□ -0.64
PSEN1-215ENST00000556011 FAM178BQ8IXR5 827 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 SLC4A1APQ9BWU0 796 aaKnown RBP11.03□□□□□ -0.64
PSEN1-215ENST00000556011 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.03□□□□□ -0.641e-9■■■■■ 54.1
PSEN1-215ENST00000556011 TLR9Q9NR96 1032 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 MAST2Q6P0Q8 1798 aa11.03□□□□□ -0.64
PSEN1-215ENST00000556011 MYO9AB2RTY4 2548 aa11.02□□□□□ -0.64
PSEN1-215ENST00000556011 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-215ENST00000556011 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.02□□□□□ -0.65
PSEN1-215ENST00000556011 FAM43AQ8N2R8 423 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 IRF2BPLQ9H1B7 796 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 TBC1D2BQ9UPU7 963 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 CEP295Q9C0D2 2601 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
PSEN1-215ENST00000556011 NCAPD2Q15021 1401 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 CNOT1A5YKK6 2376 aaKnown RBP11.01□□□□□ -0.65
PSEN1-215ENST00000556011 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
PSEN1-215ENST00000556011 PBX2P40425 430 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 KIAA2012Q0VF49 1180 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 BRI3BPQ8WY22 251 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 MGAMO43451 1857 aa11.01□□□□□ -0.65
PSEN1-215ENST00000556011 COL6A1P12109 1028 aa11□□□□□ -0.65
PSEN1-215ENST00000556011 SP8Q8IXZ3 490 aa11□□□□□ -0.65
PSEN1-215ENST00000556011 BADQ92934 168 aa11□□□□□ -0.65
PSEN1-215ENST00000556011 PRKAG2Q9UGJ0 569 aa11□□□□□ -0.65
PSEN1-215ENST00000556011 CABP4P57796 275 aa10.99□□□□□ -0.65
PSEN1-215ENST00000556011 MS4A4AQ96JQ5 239 aa10.99□□□□□ -0.65
PSEN1-215ENST00000556011 DLL3Q9NYJ7 618 aa10.99□□□□□ -0.65
PSEN1-215ENST00000556011 ITPR1Q14643 2758 aa10.99□□□□□ -0.65
PSEN1-215ENST00000556011 IRS1P35568 1242 aa10.98□□□□□ -0.65
PSEN1-215ENST00000556011 SAMD1Q6SPF0 538 aaPredicted RBP10.98□□□□□ -0.65
PSEN1-215ENST00000556011 HLA-CQ95604 372 aa10.98□□□□□ -0.65
PSEN1-215ENST00000556011 KCNQ5Q9NR82 932 aa10.98□□□□□ -0.65
PSEN1-215ENST00000556011 A0A087WZG4 1122 aa10.97□□□□□ -0.65
PSEN1-215ENST00000556011 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
PSEN1-215ENST00000556011 HELBQ8NG08 1087 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-215ENST00000556011 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-215ENST00000556011 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
PSEN1-215ENST00000556011 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
PSEN1-215ENST00000556011 ADRB1P08588 477 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 NBL1P41271 181 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 DMWDQ09019 674 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 NKD2Q969F2 451 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-215ENST00000556011 PBX4Q9BYU1 374 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 OGDHLQ9ULD0 1010 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 JAG2Q9Y219 1238 aa10.96□□□□□ -0.65
PSEN1-215ENST00000556011 IGSF10Q6WRI0 2623 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 CCL15-CCL14A0A0B4J2E2 113 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 KALRNO60229 2985 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 ITGAEP38570 1179 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 CCL15Q16663 113 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 KIAA2013Q8IYS2 634 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 KDM2AQ9Y2K7 1162 aa10.95□□□□□ -0.66
PSEN1-215ENST00000556011 AOX1Q06278 1338 aa10.94□□□□□ -0.66
PSEN1-215ENST00000556011 GRXCR1A8MXD5 290 aa10.94□□□□□ -0.66
PSEN1-215ENST00000556011 EPHB4P54760 987 aa10.94□□□□□ -0.66
PSEN1-215ENST00000556011 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
PSEN1-215ENST00000556011 C17orf99Q6UX52 265 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms