RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 MYL5Q02045 173 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 MAPK8IP2Q13387 824 aaPredicted RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 GNL2Q13823 731 aaKnown RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 MCMDC2Q4G0Z9 681 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 LINS1Q8NG48 757 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 HNRNPLLQ8WVV9 542 aaKnown RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 ZNF274Q96GC6 653 aaPredicted RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 CCDC34Q96HJ3 373 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 RRP15Q9Y3B9 282 aaKnown RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 COL15A1P39059 1388 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 CARMIL3Q8ND23 1372 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 SPTLC2O15270 562 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 ZNF202O95125 648 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 SERPINC1P01008 464 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
CHD8-209ENST00000555935 LONRF2Q1L5Z9 754 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 BRAPQ7Z569 592 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 TICAM2Q86XR7 235 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 C10orf67Q8IYJ2 551 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
CHD8-209ENST00000555935 PLEKHG2Q9H7P9 1386 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 CMA1P23946 247 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 FOSBP53539 338 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 GNG11P61952 73 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 EXOSC10Q01780 885 aaKnown RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 CFAP100Q494V2 611 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 SIL1Q9H173 461 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 HSD3B7Q9H2F3 369 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 TUBE1Q9UJT0 475 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 STX10O60499 249 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 EIF3JO75822 258 aaKnown RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 PLPPR3Q6T4P5 718 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 TMEM139Q8IV31 216 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 RGS22Q8NE09 1264 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 BICC1Q9H694 974 aaKnown RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 LCMT1Q9UIC8 334 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.97□□□□□ -0.97
CHD8-209ENST00000555935 ZNF609O15014 1411 aa8.97□□□□□ -0.97
CHD8-209ENST00000555935 SH3TC1Q8TE82 1336 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 A0A1B0GUL7 405 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 BIN1O00499 593 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 TUBB2AQ13885 445 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 STOX1Q6ZVD7 989 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 FBXL16Q8N461 479 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 KIFC2Q96AC6 838 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 KAZALD1Q96I82 304 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 BAG1Q99933 345 aaPredicted RBP8.96□□□□□ -0.97
CHD8-209ENST00000555935 TUBB2BQ9BVA1 445 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 LRRC2Q9BYS8 371 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 BRMS1Q9HCU9 246 aa8.96□□□□□ -0.97
CHD8-209ENST00000555935 TRIM66O15016 1216 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 ERLIN1O75477 346 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 DDX58O95786 925 aaKnown RBP8.96□□□□□ -0.98
CHD8-209ENST00000555935 ATP1A3P13637 1013 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 PDIA3P30101 505 aaKnown RBP8.96□□□□□ -0.98
CHD8-209ENST00000555935 USP5P45974 858 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 CWF19L2Q2TBE0 894 aaKnown RBP8.96□□□□□ -0.98
CHD8-209ENST00000555935 HDXQ7Z353 690 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 WDR24Q96S15 920 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 DSCC1Q9BVC3 393 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.98
CHD8-209ENST00000555935 CLIC4Q9Y696 253 aa8.96□□□□□ -0.98
CHD8-209ENST00000555935 TSPOAP1O95153 1857 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 H3BQF6 201 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 ANXA1P04083 346 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 PFKFB1P16118 471 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 MAGEA9P43362 315 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 CCT2P78371 535 aaKnown RBP8.95□□□□□ -0.98
CHD8-209ENST00000555935 GUCY1B3Q02153 619 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 TBX2Q13207 712 aaPredicted RBP8.95□□□□□ -0.98
CHD8-209ENST00000555935 MYSM1Q5VVJ2 828 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 ICE2Q659A1 982 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 OLFM4Q6UX06 510 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 EPC1Q9H2F5 836 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 ANKARQ7Z5J8 1434 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 TUBBP07437 444 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 TEFQ10587 303 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 AXDND1Q5T1B0 1012 aaPredicted RBP8.95□□□□□ -0.98
CHD8-209ENST00000555935 SYNE3Q6ZMZ3 975 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 SRGAP1Q7Z6B7 1085 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 CEP112Q8N8E3 955 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 DPF2Q92785 391 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 C8orf76Q96K31 380 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 HAUS7Q99871 368 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 HELLSQ9NRZ9 838 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 GEMIN8Q9NWZ8 242 aaKnown RBP8.95□□□□□ -0.98
CHD8-209ENST00000555935 RAB21Q9UL25 225 aa8.95□□□□□ -0.98
CHD8-209ENST00000555935 BTBD11A6QL63 1104 aa8.94□□□□□ -0.98
CHD8-209ENST00000555935 FDPSP14324 419 aaKnown RBP8.94□□□□□ -0.98
CHD8-209ENST00000555935 GTF2A1P52655 376 aaPredicted RBP8.94□□□□□ -0.98
CHD8-209ENST00000555935 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
CHD8-209ENST00000555935 ANO1Q5XXA6 986 aa8.94□□□□□ -0.98
CHD8-209ENST00000555935 CCDC129Q6ZRS4 1044 aa8.94□□□□□ -0.98
CHD8-209ENST00000555935 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms