RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 TMCO4Q5TGY1 634 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 TDRD7Q8NHU6 1098 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 G3BP2Q9UN86 482 aaKnown RBP11.93□□□□□ -0.5
EFCAB11-208ENST00000555872 EDC4Q6P2E9 1401 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 SEC31AO94979 1220 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 PYGLP06737 847 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 TTC30BQ8N4P2 665 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 NUDT16Q96DE0 195 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 CCDC69A6NI79 296 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 TPM1P09493 284 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 OAS2P29728 719 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 INF2Q27J81 1249 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 TWISTNBQ3B726 338 aaPredicted RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 NOM1Q5C9Z4 860 aaKnown RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 DRAXINQ8NBI3 349 aaPredicted RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 ARGLU1Q9NWB6 273 aaPredicted RBP11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
EFCAB11-208ENST00000555872 CDKL5O76039 1030 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 SNX1Q13596 522 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 AGAP3Q96P47 875 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 USP16Q9Y5T5 823 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 TMCO5BA8MYB1 307 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 GRIK3Q13003 919 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 FBXO18Q8NFZ0 1043 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 L2HGDHQ9H9P8 463 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 ATP10DQ9P241 1426 aa11.91□□□□□ -0.5
EFCAB11-208ENST00000555872 C21orf2O43822 256 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 NEMFO60524 1076 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 KCNA6P17658 529 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 CHMLP26374 656 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 FLT3P36888 993 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 LMAN1P49257 510 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 CCNHP51946 323 aaPredicted RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 IRF5Q13568 498 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 SNW1Q13573 536 aaKnown RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 DUSP9Q99956 384 aaKnown RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 MTMR6Q9Y217 621 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 MAP4K4O95819 1239 aaPredicted RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 AK2P54819 239 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 CCZ1BP86790 482 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 CCZ1P86791 482 aaPredicted RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 GOLGA5Q8TBA6 731 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 UBXN4Q92575 508 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 CCDC34Q96HJ3 373 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 IRX2Q9BZI1 471 aaPredicted RBP11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 TMOD4Q9NZQ9 345 aa11.9□□□□□ -0.5
EFCAB11-208ENST00000555872 IMPDH2P12268 514 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 GJB2P29033 226 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 FAM173BQ6P4H8 233 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 UHMK1Q8TAS1 419 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 C17orf50Q8WW18 174 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 BICD1Q96G01 975 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 PLEKHG4BQ96PX9 1271 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 OSBPL3Q9H4L5 887 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 GOLGA6L4A6NEF3 574 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 GOLGA6L19H0YKK7 550 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 KIF2AO00139 706 aaPredicted RBP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 DIAPH1O60610 1272 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 CDC25BP30305 580 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 SMC1AQ14683 1233 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 TTLL5Q6EMB2 1281 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 FMNL3Q8IVF7 1028 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 REXO1L1PQ8IX06 675 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 AK7Q96M32 723 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 CRACR2AQ9BSW2 395 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
EFCAB11-208ENST00000555872 SASH3O75995 380 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 LMNB1P20700 586 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 PRKAR2BP31323 418 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 ABL2P42684 1182 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 TSNAXIP1Q2TAA8 658 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 RUFY3Q7L099 469 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 IL25Q9H293 177 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 ADGRL3Q9HAR2 1447 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 CCDC93Q567U6 631 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 MEIS3Q99687 375 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms