RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 RBM26Q5T8P6 1007 aaKnown RBP28.27■■■□□ 2.12
CDKN3-208ENST00000555837 SAMD7Q7Z3H4 446 aa28.27■■■□□ 2.12
CDKN3-208ENST00000555837 SEMA3EO15041 775 aa28.26■■■□□ 2.11
CDKN3-208ENST00000555837 ITGBL1O95965 494 aaPredicted RBP28.26■■■□□ 2.11
CDKN3-208ENST00000555837 SURF6O75683 361 aaKnown RBP28.25■■■□□ 2.11
CDKN3-208ENST00000555837 ERC1Q8IUD2 1116 aa28.25■■■□□ 2.11
CDKN3-208ENST00000555837 TRPM4Q8TD43 1214 aa28.25■■■□□ 2.11
CDKN3-208ENST00000555837 SUGT1Q9Y2Z0 365 aa28.25■■■□□ 2.11
CDKN3-208ENST00000555837 PASKQ96RG2 1323 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 ZBTB22O15209 634 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 MFSD14BQ5SR56 506 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 CEP85Q6P2H3 762 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 KIAA0825Q8IV33 1275 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 WDR66Q8TBY9 1149 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 C1orf115Q9H7X2 142 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 CREBZFQ9NS37 354 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 ZBTB40Q9NUA8 1239 aa28.24■■■□□ 2.11
CDKN3-208ENST00000555837 MYO1BO43795 1136 aa28.23■■■□□ 2.11
CDKN3-208ENST00000555837 GORABQ5T7V8 394 aa28.23■■■□□ 2.11
CDKN3-208ENST00000555837 SULF1Q8IWU6 871 aa28.23■■■□□ 2.11
CDKN3-208ENST00000555837 GPR108Q9NPR9 543 aa28.23■■■□□ 2.11
CDKN3-208ENST00000555837 NOP58Q9Y2X3 529 aaKnown RBP28.23■■■□□ 2.11
CDKN3-208ENST00000555837 MAST3O60307 1309 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 PITPNM2Q9BZ72 1349 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 TMEM88BA6NKF7 163 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 BCAMP50895 628 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 HIRAP54198 1017 aaPredicted RBP28.22■■■□□ 2.11
CDKN3-208ENST00000555837 TFCP2Q12800 502 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 DENND2AQ9ULE3 1009 aa28.22■■■□□ 2.11
CDKN3-208ENST00000555837 DLGAP5Q15398 846 aa28.21■■■□□ 2.11
CDKN3-208ENST00000555837 A0A1B0GUL7 405 aa28.2■■■□□ 2.1
CDKN3-208ENST00000555837 SCARF1Q14162 830 aa28.2■■■□□ 2.1
CDKN3-208ENST00000555837 KRT26Q7Z3Y9 468 aa28.2■■■□□ 2.1
CDKN3-208ENST00000555837 ZGPATQ8N5A5 531 aaKnown RBP28.2■■■□□ 2.1
CDKN3-208ENST00000555837 NEUROD6Q96NK8 337 aa28.2■■■□□ 2.1
CDKN3-208ENST00000555837 SHTN1A0MZ66 631 aa28.19■■■□□ 2.1
CDKN3-208ENST00000555837 RRP1P56182 461 aaKnown RBP28.19■■■□□ 2.1
CDKN3-208ENST00000555837 CHAF1AQ13111 956 aaPredicted RBP28.19■■■□□ 2.1
CDKN3-208ENST00000555837 MTMR14Q8NCE2 650 aa28.19■■■□□ 2.1
CDKN3-208ENST00000555837 MXD3Q9BW11 206 aa28.18■■■□□ 2.1
CDKN3-208ENST00000555837 SERPINA10Q9UK55 444 aa28.18■■■□□ 2.1
CDKN3-208ENST00000555837 HDLBPQ00341 1268 aaKnown RBP28.17■■■□□ 2.1
CDKN3-208ENST00000555837 GGA3Q9NZ52 723 aa28.17■■■□□ 2.1
CDKN3-208ENST00000555837 TIMM10P62072 90 aa28.16■■■□□ 2.1
CDKN3-208ENST00000555837 APOBEC3FQ8IUX4 373 aaKnown RBP28.16■■■□□ 2.1
CDKN3-208ENST00000555837 CERS5Q8N5B7 392 aa28.16■■■□□ 2.1
CDKN3-208ENST00000555837 XAGE2Q96GT9 111 aa28.16■■■□□ 2.1
CDKN3-208ENST00000555837 MRIQ9BWK5 157 aa28.16■■■□□ 2.1
CDKN3-208ENST00000555837 TTF2Q9UNY4 1162 aaKnown RBP28.16■■■□□ 2.1
CDKN3-208ENST00000555837 IQSEC3Q9UPP2 1182 aaPredicted RBP28.16■■■□□ 2.1
CDKN3-208ENST00000555837 PDS5AQ29RF7 1337 aaKnown RBP28.16■■■□□ 2.1
CDKN3-208ENST00000555837 WNT10BO00744 389 aa28.15■■■□□ 2.1
CDKN3-208ENST00000555837 RBM5P52756 815 aaKnown RBP eCLIP28.15■■■□□ 2.1
CDKN3-208ENST00000555837 ANGEL2Q5VTE6 544 aaKnown RBP28.15■■■□□ 2.1
CDKN3-208ENST00000555837 CCDC102BQ68D86 513 aa28.15■■■□□ 2.1
CDKN3-208ENST00000555837 F8W031 263 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-208ENST00000555837 EGFRP00533 1210 aa28.14■■■□□ 2.1
CDKN3-208ENST00000555837 UQCRFS1P1P0C7P4 283 aa28.14■■■□□ 2.1
CDKN3-208ENST00000555837 AAMPQ13685 434 aa28.14■■■□□ 2.1
CDKN3-208ENST00000555837 CCDC158Q5M9N0 1113 aa28.14■■■□□ 2.1
CDKN3-208ENST00000555837 GLIS2Q9BZE0 524 aaPredicted RBP28.14■■■□□ 2.1
CDKN3-208ENST00000555837 JAG2Q9Y219 1238 aa28.14■■■□□ 2.1
CDKN3-208ENST00000555837 RAB11FIP3O75154 756 aa28.13■■■□□ 2.09
CDKN3-208ENST00000555837 C20orf194Q5TEA3 1177 aa28.13■■■□□ 2.09
CDKN3-208ENST00000555837 SPTY2D1Q68D10 685 aaPredicted RBP28.13■■■□□ 2.09
CDKN3-208ENST00000555837 USP48Q86UV5 1035 aa28.13■■■□□ 2.09
CDKN3-208ENST00000555837 CFAP100Q494V2 611 aa28.12■■■□□ 2.09
CDKN3-208ENST00000555837 TEKT1Q969V4 418 aa28.12■■■□□ 2.09
CDKN3-208ENST00000555837 ZNF646O15015 1829 aaPredicted RBP28.12■■■□□ 2.09
CDKN3-208ENST00000555837 SALL1Q9NSC2 1324 aa28.12■■■□□ 2.09
CDKN3-208ENST00000555837 NF2P35240 595 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 TNFAIP1Q13829 316 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 NBPF9Q3BBW0 867 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 TNNI3KQ59H18 835 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 SLF2Q8IX21 1173 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 ABT1Q9ULW3 272 aaKnown RBP28.11■■■□□ 2.09
CDKN3-208ENST00000555837 FPGT-TNNI3KV9GXZ4 949 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 ARAP2Q8WZ64 1704 aa28.11■■■□□ 2.09
CDKN3-208ENST00000555837 CELF2O95319 508 aaKnown RBP28.1■■■□□ 2.09
CDKN3-208ENST00000555837 PHKA1P46020 1223 aa28.1■■■□□ 2.09
CDKN3-208ENST00000555837 KIF1BPQ96EK5 621 aa28.1■■■□□ 2.09
CDKN3-208ENST00000555837 SPDYE2BA6NHP3 402 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 IGSF3O75054 1194 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 LDHBP07195 334 aaKnown RBP28.09■■■□□ 2.09
CDKN3-208ENST00000555837 SPDYE6P0CI01 402 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 C2orf69Q8N8R5 385 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 KLRG1Q96E93 195 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 ZBED3Q96IU2 234 aaPredicted RBP28.09■■■□□ 2.09
CDKN3-208ENST00000555837 PPP2R3BQ9Y5P8 575 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 MYH13Q9UKX3 1938 aa28.09■■■□□ 2.09
CDKN3-208ENST00000555837 TRAF5O00463 557 aa28.08■■■□□ 2.09
CDKN3-208ENST00000555837 ADORA1P30542 326 aa28.08■■■□□ 2.09
CDKN3-208ENST00000555837 CLASRPQ8N2M8 674 aaKnown RBP28.08■■■□□ 2.09
CDKN3-208ENST00000555837 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
CDKN3-208ENST00000555837 COL1A1P02452 1464 aaPredicted RBP28.08■■■□□ 2.09
CDKN3-208ENST00000555837 CRKP46108 304 aa28.07■■■□□ 2.08
CDKN3-208ENST00000555837 TTC39AQ5SRH9 613 aa28.07■■■□□ 2.08
CDKN3-208ENST00000555837 HHIPL2Q6UWX4 724 aa28.07■■■□□ 2.08
CDKN3-208ENST00000555837 ZNF408Q9H9D4 720 aa28.07■■■□□ 2.08
CDKN3-208ENST00000555837 TMOD2Q9NZR1 351 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms