RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 ECM29Q5VYK3 1845 aa24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 RBBP6Q7Z6E9 1792 aaKnown RBP24.37■■□□□ 1.49
SUPT16H-203ENST00000555752 EN2P19622 333 aaPredicted RBP24.36■■□□□ 1.49
SUPT16H-203ENST00000555752 CHRNDQ07001 517 aa24.36■■□□□ 1.49
SUPT16H-203ENST00000555752 INTS3Q68E01 1043 aaKnown RBP24.36■■□□□ 1.49
SUPT16H-203ENST00000555752 IRS2Q9Y4H2 1338 aa24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 KCNJ4P48050 445 aa24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 NBPF12Q5TAG4 269 aaPredicted RBP24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 TSR2Q969E8 191 aaKnown RBP24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 MPHOSPH8Q99549 860 aa24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 KIAA0100Q14667 2235 aaKnown RBP24.35■■□□□ 1.49
SUPT16H-203ENST00000555752 PPP1R12BO60237 982 aaPredicted RBP24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 CASP7P55210 303 aa24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 CFAP100Q494V2 611 aa24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 HELBQ8NG08 1087 aaPredicted RBP24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 ERO1AQ96HE7 468 aa24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 PRMT6Q96LA8 375 aaPredicted RBP24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 PTPN18Q99952 460 aa24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 JAG2Q9Y219 1238 aa24.34■■□□□ 1.49
SUPT16H-203ENST00000555752 TAF5LO75529 589 aa24.33■■□□□ 1.49
SUPT16H-203ENST00000555752 MTMR14Q8NCE2 650 aa24.33■■□□□ 1.49
SUPT16H-203ENST00000555752 USP2O75604 605 aaPredicted RBP24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 CSF1RP07333 972 aa24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 GCKRQ14397 625 aa24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 PLA2G12BQ9BX93 195 aa24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 VEZTQ9HBM0 779 aa24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 PPP2R3BQ9Y5P8 575 aa24.32■■□□□ 1.48
SUPT16H-203ENST00000555752 A0A1B0GUL6 1792 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 SPDYE2BA6NHP3 402 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 SPDYE6P0CI01 402 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 ARMC5Q96C12 935 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 STK31Q9BXU1 1019 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 EFCC1Q9HA90 598 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 OTOFQ9HC10 1997 aa24.31■■□□□ 1.48
SUPT16H-203ENST00000555752 SUPT20HL1Q3ZLR7 823 aa24.3■■□□□ 1.48
SUPT16H-203ENST00000555752 FXR1P51114 621 aaKnown RBP eCLIP24.29■■□□□ 1.48
SUPT16H-203ENST00000555752 SP3Q02447 781 aa24.29■■□□□ 1.48
SUPT16H-203ENST00000555752 RASA3Q14644 834 aa24.29■■□□□ 1.48
SUPT16H-203ENST00000555752 MYO1BO43795 1136 aa24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 SLC4A2P04920 1241 aa24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 IREB2P48200 963 aaKnown RBP24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 OTUD7BQ6GQQ9 843 aa24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 CHMP4AQ9BY43 222 aa24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 ELP3Q9H9T3 547 aa24.28■■□□□ 1.48
SUPT16H-203ENST00000555752 IL1R1P14778 569 aa24.27■■□□□ 1.48
SUPT16H-203ENST00000555752 CDAN1Q8IWY9 1227 aa24.27■■□□□ 1.48
SUPT16H-203ENST00000555752 ANKRD13AQ8IZ07 590 aa24.27■■□□□ 1.48
SUPT16H-203ENST00000555752 CNKSR2Q8WXI2 1034 aa24.27■■□□□ 1.48
SUPT16H-203ENST00000555752 ANKRD18BA2A2Z9 1011 aa24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 TESPA1A2RU30 521 aaPredicted RBP24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 UNCXA6NJT0 531 aa24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 RBM5P52756 815 aaKnown RBP eCLIP24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 C15orf52Q6ZUT6 534 aaKnown RBP24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 OPTNQ96CV9 577 aa24.26■■□□□ 1.47
SUPT16H-203ENST00000555752 TWISTNBQ3B726 338 aaPredicted RBP24.25■■□□□ 1.47
SUPT16H-203ENST00000555752 MS4A4AQ96JQ5 239 aa24.25■■□□□ 1.47
SUPT16H-203ENST00000555752 FLIIQ13045 1269 aa24.24■■□□□ 1.47
SUPT16H-203ENST00000555752 ZNF804AQ7Z570 1209 aa24.24■■□□□ 1.47
SUPT16H-203ENST00000555752 ZNF333Q96JL9 665 aa24.24■■□□□ 1.47
SUPT16H-203ENST00000555752 COLQQ9Y215 455 aaPredicted RBP24.24■■□□□ 1.47
SUPT16H-203ENST00000555752 PTCH2Q9Y6C5 1203 aa24.24■■□□□ 1.47
SUPT16H-203ENST00000555752 MYCP01106 439 aaPredicted RBP24.23■■□□□ 1.47
SUPT16H-203ENST00000555752 FOXO4P98177 505 aa24.23■■□□□ 1.47
SUPT16H-203ENST00000555752 BRI3BPQ8WY22 251 aa24.23■■□□□ 1.47
SUPT16H-203ENST00000555752 MYH16Q9H6N6 1097 aa24.23■■□□□ 1.47
SUPT16H-203ENST00000555752 PRKRIP1Q9H875 184 aaPredicted RBP24.23■■□□□ 1.47
SUPT16H-203ENST00000555752 ZSWIM8A7E2V4 1837 aa24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 FKBP1AP62942 108 aaKnown RBP24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 FKBP5Q13451 457 aaPredicted RBP24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 DNAAF4Q8WXU2 420 aa24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 TMEM106CQ9BVX2 250 aa24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 TDRD3Q9H7E2 651 aaKnown RBP24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 ZNF70Q9UC06 446 aaPredicted RBP24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 CHMP3Q9Y3E7 222 aa24.22■■□□□ 1.47
SUPT16H-203ENST00000555752 PLIN1O60240 522 aa24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 IFIT5Q13325 482 aaKnown RBP24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 LINS1Q8NG48 757 aa24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 ZNF594Q96JF6 807 aaPredicted RBP24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 TEPSINQ96N21 525 aa24.21■■□□□ 1.47
SUPT16H-203ENST00000555752 TAF1CQ15572 869 aaPredicted RBP24.2■■□□□ 1.46
SUPT16H-203ENST00000555752 SPDYE2Q495Y8 402 aa24.2■■□□□ 1.46
SUPT16H-203ENST00000555752 SLC9C1Q4G0N8 1177 aa24.2■■□□□ 1.46
SUPT16H-203ENST00000555752 CCL15-CCL14A0A0B4J2E2 113 aa24.19■■□□□ 1.46
SUPT16H-203ENST00000555752 CCL15Q16663 113 aa24.19■■□□□ 1.46
SUPT16H-203ENST00000555752 FAM43AQ8N2R8 423 aa24.19■■□□□ 1.46
SUPT16H-203ENST00000555752 TCP10L2B9ZVM9 353 aa24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 VGLL4Q14135 290 aa24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 EPHA10Q5JZY3 1008 aa24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 ARHGAP39Q9C0H5 1083 aa24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 TMEM39BQ9GZU3 492 aa24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 TTF2Q9UNY4 1162 aaKnown RBP24.18■■□□□ 1.46
SUPT16H-203ENST00000555752 SLC4A8Q2Y0W8 1093 aa24.17■■□□□ 1.46
SUPT16H-203ENST00000555752 MFSD14BQ5SR56 506 aa24.17■■□□□ 1.46
SUPT16H-203ENST00000555752 LMBR1LQ6UX01 489 aa24.17■■□□□ 1.46
SUPT16H-203ENST00000555752 OTUD5Q96G74 571 aa24.17■■□□□ 1.46
SUPT16H-203ENST00000555752 ZFYVE28Q9HCC9 887 aa24.17■■□□□ 1.46
SUPT16H-203ENST00000555752 FAM205AQ6ZU69 1335 aa24.16■■□□□ 1.46
SUPT16H-203ENST00000555752 F6X3S4 739 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms