RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 JAG2Q9Y219 1238 aa19.36■□□□□ 0.69
SNX6-205ENST00000555648 IRS2Q9Y4H2 1338 aa19.35■□□□□ 0.69
SNX6-205ENST00000555648 FAM155AB1AL88 458 aaPredicted RBP19.35■□□□□ 0.69
SNX6-205ENST00000555648 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
SNX6-205ENST00000555648 SLC10A3P09131 477 aa19.35■□□□□ 0.69
SNX6-205ENST00000555648 RABL6Q3YEC7 729 aaPredicted RBP19.35■□□□□ 0.69
SNX6-205ENST00000555648 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
SNX6-205ENST00000555648 THSD7BQ9C0I4 1608 aa19.35■□□□□ 0.69
SNX6-205ENST00000555648 UBE2Q2LH0YL09 131 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 GYG1P46976 350 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 CAVIN4Q5BKX8 364 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 REM2Q8IYK8 340 aaPredicted RBP19.34■□□□□ 0.69
SNX6-205ENST00000555648 CERS5Q8N5B7 392 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 HDAC5Q9UQL6 1122 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 RIPOR2Q9Y4F9 1068 aa19.34■□□□□ 0.69
SNX6-205ENST00000555648 CFAP100Q494V2 611 aa19.33■□□□□ 0.68
SNX6-205ENST00000555648 MFSD14BQ5SR56 506 aa19.33■□□□□ 0.68
SNX6-205ENST00000555648 RASAL3Q86YV0 1011 aa19.33■□□□□ 0.68
SNX6-205ENST00000555648 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.68
SNX6-205ENST00000555648 API5Q9BZZ5 524 aaKnown RBP19.33■□□□□ 0.68
SNX6-205ENST00000555648 UBTFL1P0CB47 393 aaPredicted RBP19.32■□□□□ 0.68
SNX6-205ENST00000555648 PRKG1Q13976 671 aa19.32■□□□□ 0.68
SNX6-205ENST00000555648 MOB2Q70IA6 237 aa19.32■□□□□ 0.68
SNX6-205ENST00000555648 MTMR14Q8NCE2 650 aa19.32■□□□□ 0.68
SNX6-205ENST00000555648 TDRD7Q8NHU6 1098 aaKnown RBP19.32■□□□□ 0.68
SNX6-205ENST00000555648 VEZTQ9HBM0 779 aa19.32■□□□□ 0.68
SNX6-205ENST00000555648 SAGE1Q9NXZ1 904 aa19.32■□□□□ 0.68
SNX6-205ENST00000555648 NOB1Q9ULX3 412 aaKnown RBP19.32■□□□□ 0.68
SNX6-205ENST00000555648 FAM205AQ6ZU69 1335 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 PCNTO95613 3336 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 PSME4Q14997 1843 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 LRRC24Q50LG9 513 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 TRMT2AQ8IZ69 625 aaKnown RBP19.31■□□□□ 0.68
SNX6-205ENST00000555648 ABHD8Q96I13 439 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
SNX6-205ENST00000555648 FAM84BQ96KN1 310 aaPredicted RBP19.31■□□□□ 0.68
SNX6-205ENST00000555648 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
SNX6-205ENST00000555648 CLRN2A0PK11 232 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 TRPA1O75762 1119 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 PDE8BO95263 885 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 IFIT1P09914 478 aaKnown RBP19.3■□□□□ 0.68
SNX6-205ENST00000555648 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 TTF2Q9UNY4 1162 aaKnown RBP19.3■□□□□ 0.68
SNX6-205ENST00000555648 PPP2R3BQ9Y5P8 575 aa19.3■□□□□ 0.68
SNX6-205ENST00000555648 CHAF1AQ13111 956 aaPredicted RBP19.29■□□□□ 0.68
SNX6-205ENST00000555648 SUPT20HL1Q3ZLR7 823 aa19.29■□□□□ 0.68
SNX6-205ENST00000555648 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
SNX6-205ENST00000555648 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
SNX6-205ENST00000555648 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
SNX6-205ENST00000555648 ANGEL1Q9UNK9 670 aaKnown RBP19.29■□□□□ 0.68
SNX6-205ENST00000555648 PPP1R12BO60237 982 aaPredicted RBP19.28■□□□□ 0.68
SNX6-205ENST00000555648 TNFAIP1Q13829 316 aa19.28■□□□□ 0.68
SNX6-205ENST00000555648 PUM3Q15397 648 aaKnown RBP19.28■□□□□ 0.68
SNX6-205ENST00000555648 FBXO33Q7Z6M2 555 aa19.28■□□□□ 0.68
SNX6-205ENST00000555648 TBC1D22AQ8WUA7 517 aa19.28■□□□□ 0.68
SNX6-205ENST00000555648 PRMT6Q96LA8 375 aaPredicted RBP19.28■□□□□ 0.68
SNX6-205ENST00000555648 IQSEC3Q9UPP2 1182 aaPredicted RBP19.28■□□□□ 0.68
SNX6-205ENST00000555648 PAPPA2Q9BXP8 1791 aa19.28■□□□□ 0.68
SNX6-205ENST00000555648 POLR2AP24928 1970 aaKnown RBP19.28■□□□□ 0.68
SNX6-205ENST00000555648 SLC5A1P13866 664 aa19.27■□□□□ 0.68
SNX6-205ENST00000555648 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.27■□□□□ 0.68
SNX6-205ENST00000555648 SERPINA10Q9UK55 444 aa19.27■□□□□ 0.68
SNX6-205ENST00000555648 COL1A1P02452 1464 aaPredicted RBP19.27■□□□□ 0.67
SNX6-205ENST00000555648 KIF16BQ96L93 1317 aa19.26■□□□□ 0.67
SNX6-205ENST00000555648 EYA2O00167 538 aa19.26■□□□□ 0.67
SNX6-205ENST00000555648 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
SNX6-205ENST00000555648 MKRN3Q13064 507 aaKnown RBP19.26■□□□□ 0.67
SNX6-205ENST00000555648 DGKZQ13574 1117 aa19.26■□□□□ 0.67
SNX6-205ENST00000555648 PCDHAC2Q9Y5I4 1007 aa19.26■□□□□ 0.67
SNX6-205ENST00000555648 CCDC85CA6NKD9 419 aa19.25■□□□□ 0.67
SNX6-205ENST00000555648 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
SNX6-205ENST00000555648 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
SNX6-205ENST00000555648 SREBF2Q12772 1141 aa19.25■□□□□ 0.67
SNX6-205ENST00000555648 SLC10A4Q96EP9 437 aa19.25■□□□□ 0.67
SNX6-205ENST00000555648 CRKP46108 304 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 BCAMP50895 628 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 RASA3Q14644 834 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
SNX6-205ENST00000555648 VGLL2Q8N8G2 317 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 LPIN2Q92539 896 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 MCOLN1Q9GZU1 580 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 SIL1Q9H173 461 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
SNX6-205ENST00000555648 IREB2P48200 963 aaKnown RBP19.23■□□□□ 0.67
SNX6-205ENST00000555648 TNNI2P48788 182 aa19.23■□□□□ 0.67
SNX6-205ENST00000555648 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
SNX6-205ENST00000555648 TDRD3Q9H7E2 651 aaKnown RBP19.23■□□□□ 0.67
SNX6-205ENST00000555648 TMOD2Q9NZR1 351 aa19.23■□□□□ 0.67
SNX6-205ENST00000555648 ZNF70Q9UC06 446 aaPredicted RBP19.23■□□□□ 0.67
SNX6-205ENST00000555648 FBXO3Q9UK99 471 aa19.23■□□□□ 0.67
SNX6-205ENST00000555648 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
SNX6-205ENST00000555648 RFX5P48382 616 aaPredicted RBP19.22■□□□□ 0.67
SNX6-205ENST00000555648 SPDYE2Q495Y8 402 aa19.22■□□□□ 0.67
SNX6-205ENST00000555648 LDLRAD1Q5T700 205 aa19.22■□□□□ 0.67
SNX6-205ENST00000555648 TEKT1Q969V4 418 aa19.22■□□□□ 0.67
SNX6-205ENST00000555648 GNL3LQ9NVN8 582 aaKnown RBP19.22■□□□□ 0.67
SNX6-205ENST00000555648 MAST3O60307 1309 aa19.22■□□□□ 0.67
SNX6-205ENST00000555648 CIAO1O76071 339 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms