RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 RASSF10A6NK89 507 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 SRGAP3O43295 1099 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 SASH1O94885 1247 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 GNAI2P04899 355 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 ZNF408Q9H9D4 720 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 FBXO3Q9UK99 471 aa25.56■■□□□ 1.68
VTI1B-205ENST00000555543 IQSEC3Q9UPP2 1182 aaPredicted RBP25.56■■□□□ 1.68
VTI1B-205ENST00000555543 ARAP2Q8WZ64 1704 aa25.55■■□□□ 1.68
VTI1B-205ENST00000555543 WNT10BO00744 389 aa25.54■■□□□ 1.68
VTI1B-205ENST00000555543 VEGFBP49765 207 aa25.54■■□□□ 1.68
VTI1B-205ENST00000555543 BCAMP50895 628 aa25.54■■□□□ 1.68
VTI1B-205ENST00000555543 FKBP1AP62942 108 aaKnown RBP25.54■■□□□ 1.68
VTI1B-205ENST00000555543 ITPRIPQ8IWB1 547 aa25.54■■□□□ 1.68
VTI1B-205ENST00000555543 SCAF8Q9UPN6 1271 aaKnown RBP25.54■■□□□ 1.68
VTI1B-205ENST00000555543 TLL2Q9Y6L7 1015 aa25.54■■□□□ 1.68
VTI1B-205ENST00000555543 F8W031 263 aaPredicted RBP25.53■■□□□ 1.68
VTI1B-205ENST00000555543 IFIT1P09914 478 aaKnown RBP25.53■■□□□ 1.68
VTI1B-205ENST00000555543 VPS37DQ86XT2 251 aa25.53■■□□□ 1.68
VTI1B-205ENST00000555543 SULF1Q8IWU6 871 aa25.53■■□□□ 1.68
VTI1B-205ENST00000555543 ZBED3Q96IU2 234 aaPredicted RBP25.53■■□□□ 1.68
VTI1B-205ENST00000555543 HDAC9Q9UKV0 1011 aa25.53■■□□□ 1.68
VTI1B-205ENST00000555543 PNMA6EA0A0J9YXQ4 647 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 IL15P40933 162 aaPredicted RBP25.52■■□□□ 1.68
VTI1B-205ENST00000555543 MMP14P50281 582 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 DEFB115Q30KQ5 88 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 CAVIN4Q5BKX8 364 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 PANK1Q8TE04 598 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 LPIN2Q92539 896 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 PCDHAC2Q9Y5I4 1007 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 PITPNM2Q9BZ72 1349 aa25.52■■□□□ 1.68
VTI1B-205ENST00000555543 SLC5A1P13866 664 aa25.51■■□□□ 1.67
VTI1B-205ENST00000555543 MFSD14BQ5SR56 506 aa25.51■■□□□ 1.67
VTI1B-205ENST00000555543 CEP126Q9P2H0 1117 aa25.51■■□□□ 1.67
VTI1B-205ENST00000555543 ATP2B3Q16720 1220 aa25.5■■□□□ 1.67
VTI1B-205ENST00000555543 SAPCD2Q86UD0 394 aa25.5■■□□□ 1.67
VTI1B-205ENST00000555543 CDCA5Q96FF9 252 aa25.5■■□□□ 1.67
VTI1B-205ENST00000555543 C1orf115Q9H7X2 142 aa25.5■■□□□ 1.67
VTI1B-205ENST00000555543 CHAF1AQ13111 956 aaPredicted RBP25.49■■□□□ 1.67
VTI1B-205ENST00000555543 COL1A1P02452 1464 aaPredicted RBP25.48■■□□□ 1.67
VTI1B-205ENST00000555543 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
VTI1B-205ENST00000555543 GRIK5Q16478 980 aa25.48■■□□□ 1.67
VTI1B-205ENST00000555543 RCAN3Q9UKA8 241 aa25.48■■□□□ 1.67
VTI1B-205ENST00000555543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.48■■□□□ 1.67
VTI1B-205ENST00000555543 AOX1Q06278 1338 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 FRAT2O75474 233 aaPredicted RBP25.47■■□□□ 1.67
VTI1B-205ENST00000555543 DLGAP5Q15398 846 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 CFAP100Q494V2 611 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 CYP4F22Q6NT55 531 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 MTMR14Q8NCE2 650 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 THSD7BQ9C0I4 1608 aa25.47■■□□□ 1.67
VTI1B-205ENST00000555543 WDR33Q9C0J8 1336 aaKnown RBP25.46■■□□□ 1.67
VTI1B-205ENST00000555543 CAPNS2Q96L46 248 aa25.46■■□□□ 1.67
VTI1B-205ENST00000555543 SPDYE2BA6NHP3 402 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 SPDYE6P0CI01 402 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 ADORA1P30542 326 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 TFCP2Q12800 502 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 POLA2Q14181 598 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 PRAMEF18Q5VWM3 479 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 PAXIP1Q6ZW49 1069 aaPredicted RBP25.45■■□□□ 1.66
VTI1B-205ENST00000555543 GBA2Q9HCG7 927 aaPredicted RBP25.45■■□□□ 1.66
VTI1B-205ENST00000555543 TTF2Q9UNY4 1162 aaKnown RBP25.45■■□□□ 1.66
VTI1B-205ENST00000555543 MYH13Q9UKX3 1938 aa25.45■■□□□ 1.66
VTI1B-205ENST00000555543 ECM29Q5VYK3 1845 aa25.44■■□□□ 1.66
VTI1B-205ENST00000555543 HSPA1AP0DMV8 641 aaKnown RBP25.44■■□□□ 1.66
VTI1B-205ENST00000555543 HSPA1BP0DMV9 641 aaKnown RBP25.44■■□□□ 1.66
VTI1B-205ENST00000555543 GRM1Q13255 1194 aa25.44■■□□□ 1.66
VTI1B-205ENST00000555543 PHKA1P46020 1223 aa25.43■■□□□ 1.66
VTI1B-205ENST00000555543 HUNKP57058 714 aa25.43■■□□□ 1.66
VTI1B-205ENST00000555543 TBC1D22AQ8WUA7 517 aa25.43■■□□□ 1.66
VTI1B-205ENST00000555543 HHIPL1Q96JK4 782 aa25.43■■□□□ 1.66
VTI1B-205ENST00000555543 PRMT6Q96LA8 375 aaPredicted RBP25.43■■□□□ 1.66
VTI1B-205ENST00000555543 TIMM10P62072 90 aa25.42■■□□□ 1.66
VTI1B-205ENST00000555543 ATP8B2P98198 1209 aa25.42■■□□□ 1.66
VTI1B-205ENST00000555543 SSH3Q8TE77 659 aa25.42■■□□□ 1.66
VTI1B-205ENST00000555543 CLRN2A0PK11 232 aa25.41■■□□□ 1.66
VTI1B-205ENST00000555543 RBM5P52756 815 aaKnown RBP eCLIP25.41■■□□□ 1.66
VTI1B-205ENST00000555543 APOBEC3FQ8IUX4 373 aaKnown RBP25.41■■□□□ 1.66
VTI1B-205ENST00000555543 C2orf69Q8N8R5 385 aa25.41■■□□□ 1.66
VTI1B-205ENST00000555543 SERPINA10Q9UK55 444 aa25.41■■□□□ 1.66
VTI1B-205ENST00000555543 A0A1B0GUL7 405 aa25.4■■□□□ 1.66
VTI1B-205ENST00000555543 ECE1P42892 770 aa25.4■■□□□ 1.66
VTI1B-205ENST00000555543 PAPPA2Q9BXP8 1791 aa25.4■■□□□ 1.66
VTI1B-205ENST00000555543 AOC2O75106 756 aa25.39■■□□□ 1.66
VTI1B-205ENST00000555543 MS4A1P11836 297 aa25.39■■□□□ 1.66
VTI1B-205ENST00000555543 CRKP46108 304 aa25.39■■□□□ 1.66
VTI1B-205ENST00000555543 G3BP1Q13283 466 aaKnown RBP eCLIP25.39■■□□□ 1.66
VTI1B-205ENST00000555543 MVPQ14764 893 aaKnown RBP25.39■■□□□ 1.66
VTI1B-205ENST00000555543 CCDC102BQ68D86 513 aa25.39■■□□□ 1.66
VTI1B-205ENST00000555543 COG6Q9Y2V7 657 aa25.39■■□□□ 1.66
VTI1B-205ENST00000555543 CEP85Q6P2H3 762 aa25.38■■□□□ 1.65
VTI1B-205ENST00000555543 AKAP2Q9Y2D5 859 aa25.38■■□□□ 1.65
VTI1B-205ENST00000555543 MOB2Q70IA6 237 aa25.37■■□□□ 1.65
VTI1B-205ENST00000555543 XAGE2Q96GT9 111 aa25.37■■□□□ 1.65
VTI1B-205ENST00000555543 VEZTQ9HBM0 779 aa25.37■■□□□ 1.65
VTI1B-205ENST00000555543 GNL3LQ9NVN8 582 aaKnown RBP25.37■■□□□ 1.65
VTI1B-205ENST00000555543 MYO1BO43795 1136 aa25.36■■□□□ 1.65
VTI1B-205ENST00000555543 C20orf194Q5TEA3 1177 aa25.36■■□□□ 1.65
VTI1B-205ENST00000555543 WDR66Q8TBY9 1149 aa25.36■■□□□ 1.65
VTI1B-205ENST00000555543 DEFB129Q9H1M3 183 aa25.36■■□□□ 1.65
VTI1B-205ENST00000555543 TDRD3Q9H7E2 651 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms