RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 WWC3Q9ULE0 1092 aa28.69■■■□□ 2.18
TMEM260-207ENST00000555497 CCDC152Q4G0S7 254 aa28.68■■■□□ 2.18
TMEM260-207ENST00000555497 CCDC183Q5T5S1 534 aa28.68■■■□□ 2.18
TMEM260-207ENST00000555497 ZSCAN25Q6NSZ9 544 aa28.68■■■□□ 2.18
TMEM260-207ENST00000555497 NGLY1Q96IV0 654 aa28.68■■■□□ 2.18
TMEM260-207ENST00000555497 LLPHQ9BRT6 129 aaKnown RBP28.68■■■□□ 2.18
TMEM260-207ENST00000555497 NCOA5Q9HCD5 579 aaKnown RBP28.68■■■□□ 2.18
TMEM260-207ENST00000555497 BCORQ6W2J9 1755 aa28.68■■■□□ 2.18
TMEM260-207ENST00000555497 PDIA3P30101 505 aaKnown RBP28.67■■■□□ 2.18
TMEM260-207ENST00000555497 CSPP1Q1MSJ5 1256 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 SMIM5Q71RC9 77 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 ZNF532Q9HCE3 1301 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 LAMB2P55268 1798 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 ATRNO75882 1429 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 SLC5A1P13866 664 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 PDE6AP16499 860 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 KRT85P78386 507 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 VPS72Q15906 364 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 TSPY26PQ9H489 355 aa28.67■■■□□ 2.18
TMEM260-207ENST00000555497 TCRBV5S4A2TA0A5A2 114 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 UBE3CQ15386 1083 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 RNF214Q8ND24 703 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 RASGRF1Q13972 1273 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 NBPF3Q9H094 633 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 TFIP11Q9UBB9 837 aaKnown RBP28.66■■■□□ 2.18
TMEM260-207ENST00000555497 RTL9Q8NET4 1388 aa28.66■■■□□ 2.18
TMEM260-207ENST00000555497 MB21D2Q8IYB1 491 aaPredicted RBP28.65■■■□□ 2.18
TMEM260-207ENST00000555497 FBXL16Q8N461 479 aa28.65■■■□□ 2.18
TMEM260-207ENST00000555497 SPATA5Q8NB90 893 aa28.65■■■□□ 2.18
TMEM260-207ENST00000555497 ZNF274Q96GC6 653 aaPredicted RBP28.65■■■□□ 2.18
TMEM260-207ENST00000555497 PHF14O94880 888 aa28.65■■■□□ 2.18
TMEM260-207ENST00000555497 RESTQ13127 1097 aa28.65■■■□□ 2.18
TMEM260-207ENST00000555497 NAP1L2Q9ULW6 460 aaPredicted RBP28.65■■■□□ 2.18
TMEM260-207ENST00000555497 PTPDC1A2A3K4 754 aa28.64■■■□□ 2.18
TMEM260-207ENST00000555497 ZNF831Q5JPB2 1677 aa28.64■■■□□ 2.18
TMEM260-207ENST00000555497 ANP32BQ92688 251 aaKnown RBP28.64■■■□□ 2.18
TMEM260-207ENST00000555497 PPFIA3O75145 1194 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 ANTXR2P58335 489 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 C3orf67Q6ZVT6 689 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 UBAP1LF5GYI3 381 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 ZNF213O14771 459 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 EVCP57679 992 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 FAM184AQ8NB25 1140 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 NKX2-3Q8TAU0 364 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 ZNF652Q9Y2D9 606 aa28.63■■■□□ 2.17
TMEM260-207ENST00000555497 IGHMBP2P38935 993 aaKnown RBP28.62■■■□□ 2.17
TMEM260-207ENST00000555497 ERFEQ4G0M1 354 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 CLEC4GQ6UXB4 293 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 DENND2AQ9ULE3 1009 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 SALL1Q9NSC2 1324 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 PRC1O43663 620 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 BCAMP50895 628 aa28.62■■■□□ 2.17
TMEM260-207ENST00000555497 TRIM44Q96DX7 344 aaPredicted RBP28.62■■■□□ 2.17
TMEM260-207ENST00000555497 ELP1O95163 1332 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 TAF1P21675 1872 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 DOCK2Q92608 1830 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 H3BQV1 296 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 FOSBP53539 338 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 CHRNDQ07001 517 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 IFFO2Q5TF58 517 aa28.61■■■□□ 2.17
TMEM260-207ENST00000555497 MCM5P33992 734 aa28.6■■■□□ 2.17
TMEM260-207ENST00000555497 NCOA7Q8NI08 942 aa28.6■■■□□ 2.17
TMEM260-207ENST00000555497 TBC1D10CQ8IV04 446 aa28.59■■■□□ 2.17
TMEM260-207ENST00000555497 PDLIM2Q96JY6 352 aa28.59■■■□□ 2.17
TMEM260-207ENST00000555497 STRBPQ96SI9 672 aaKnown RBP28.59■■■□□ 2.17
TMEM260-207ENST00000555497 LEO1Q8WVC0 666 aaPredicted RBP28.59■■■□□ 2.17
TMEM260-207ENST00000555497 HMGN5P82970 282 aaKnown RBP28.58■■■□□ 2.17
TMEM260-207ENST00000555497 BCL2L12Q9HB09 334 aa28.58■■■□□ 2.17
TMEM260-207ENST00000555497 APPP05067 770 aa28.58■■■□□ 2.17
TMEM260-207ENST00000555497 MAGEB6Q8N7X4 407 aa28.58■■■□□ 2.17
TMEM260-207ENST00000555497 SPATA32Q96LK8 384 aa28.58■■■□□ 2.17
TMEM260-207ENST00000555497 SCAND2PQ9GZW5 306 aaPredicted RBP28.58■■■□□ 2.17
TMEM260-207ENST00000555497 WTIPA6NIX2 430 aaPredicted RBP28.57■■■□□ 2.16
TMEM260-207ENST00000555497 ESPNB1AK53 854 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 GIMAP6Q6P9H5 292 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 BICDL1Q6ZP65 573 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
TMEM260-207ENST00000555497 HPS5Q9UPZ3 1129 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 CASZ1Q86V15 1759 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 CNTNAP4Q9C0A0 1308 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 FDPSP14324 419 aaKnown RBP28.57■■■□□ 2.16
TMEM260-207ENST00000555497 LIG1P18858 919 aa28.57■■■□□ 2.16
TMEM260-207ENST00000555497 LETM1O95202 739 aaPredicted RBP28.56■■■□□ 2.16
TMEM260-207ENST00000555497 FAM182BQ5T319 152 aa28.56■■■□□ 2.16
TMEM260-207ENST00000555497 TBC1D9BQ66K14 1250 aa28.56■■■□□ 2.16
TMEM260-207ENST00000555497 NAA16Q6N069 864 aaPredicted RBP28.56■■■□□ 2.16
TMEM260-207ENST00000555497 RALYLQ86SE5 291 aaKnown RBP28.56■■■□□ 2.16
TMEM260-207ENST00000555497 AIDAQ96BJ3 306 aa28.55■■■□□ 2.16
TMEM260-207ENST00000555497 ZSCAN16Q9H4T2 348 aaPredicted RBP28.55■■■□□ 2.16
TMEM260-207ENST00000555497 KLF18A0A0U1RQI7 1052 aa28.55■■■□□ 2.16
TMEM260-207ENST00000555497 MAP3K12Q12852 859 aa28.55■■■□□ 2.16
TMEM260-207ENST00000555497 RAB11FIP4Q86YS3 637 aa28.55■■■□□ 2.16
TMEM260-207ENST00000555497 FUCA2Q9BTY2 467 aa28.55■■■□□ 2.16
TMEM260-207ENST00000555497 ADD1P35611 737 aaKnown RBP28.54■■■□□ 2.16
TMEM260-207ENST00000555497 CYB5R4Q7L1T6 521 aa28.54■■■□□ 2.16
TMEM260-207ENST00000555497 EPB41L4AQ9HCS5 686 aaPredicted RBP28.54■■■□□ 2.16
TMEM260-207ENST00000555497 SF3B3Q15393 1217 aaKnown RBP28.54■■■□□ 2.16
TMEM260-207ENST00000555497 PGBD1Q96JS3 809 aa28.54■■■□□ 2.16
TMEM260-207ENST00000555497 CDC5LQ99459 802 aaKnown RBP28.54■■■□□ 2.16
TMEM260-207ENST00000555497 BTAF1O14981 1849 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms