RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 RGMBQ6NW40 437 aa24.39■■□□□ 1.49
CBLN3-202ENST00000555436 TDRD7Q8NHU6 1098 aaKnown RBP24.39■■□□□ 1.49
CBLN3-202ENST00000555436 KLHDC4Q8TBB5 520 aa24.39■■□□□ 1.49
CBLN3-202ENST00000555436 ARHGAP45Q92619 1136 aa24.39■■□□□ 1.49
CBLN3-202ENST00000555436 FAM84BQ96KN1 310 aaPredicted RBP24.39■■□□□ 1.49
CBLN3-202ENST00000555436 BEGAINQ9BUH8 593 aa24.39■■□□□ 1.49
CBLN3-202ENST00000555436 NOGQ13253 232 aa24.38■■□□□ 1.49
CBLN3-202ENST00000555436 VGLL2Q8N8G2 317 aa24.38■■□□□ 1.49
CBLN3-202ENST00000555436 SCAF8Q9UPN6 1271 aaKnown RBP24.38■■□□□ 1.49
CBLN3-202ENST00000555436 FAM205AQ6ZU69 1335 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 PDE8BO95263 885 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 HSPA8P11142 646 aaKnown RBP24.37■■□□□ 1.49
CBLN3-202ENST00000555436 RFX5P48382 616 aaPredicted RBP24.37■■□□□ 1.49
CBLN3-202ENST00000555436 LBX1P52954 281 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 FKBP1BP68106 108 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 MTMR14Q8NCE2 650 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 JAG2Q9Y219 1238 aa24.37■■□□□ 1.49
CBLN3-202ENST00000555436 DLGAP5Q15398 846 aa24.36■■□□□ 1.49
CBLN3-202ENST00000555436 CCDC102AQ96A19 550 aa24.36■■□□□ 1.49
CBLN3-202ENST00000555436 FAM155AB1AL88 458 aaPredicted RBP24.35■■□□□ 1.49
CBLN3-202ENST00000555436 FBXO33Q7Z6M2 555 aa24.35■■□□□ 1.49
CBLN3-202ENST00000555436 APOBEC3FQ8IUX4 373 aaKnown RBP24.35■■□□□ 1.49
CBLN3-202ENST00000555436 HDAC5Q9UQL6 1122 aa24.35■■□□□ 1.49
CBLN3-202ENST00000555436 F8W031 263 aaPredicted RBP24.34■■□□□ 1.49
CBLN3-202ENST00000555436 EYA2O00167 538 aa24.34■■□□□ 1.49
CBLN3-202ENST00000555436 ZNF157P51786 506 aaPredicted RBP24.34■■□□□ 1.49
CBLN3-202ENST00000555436 PTPN12Q05209 780 aaKnown RBP24.34■■□□□ 1.49
CBLN3-202ENST00000555436 PRAMEF18Q5VWM3 479 aa24.34■■□□□ 1.49
CBLN3-202ENST00000555436 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.49
CBLN3-202ENST00000555436 MFSD14BQ5SR56 506 aa24.33■■□□□ 1.49
CBLN3-202ENST00000555436 INTS3Q68E01 1043 aaKnown RBP24.33■■□□□ 1.49
CBLN3-202ENST00000555436 VPS37DQ86XT2 251 aa24.33■■□□□ 1.49
CBLN3-202ENST00000555436 ZIC5Q96T25 663 aa24.33■■□□□ 1.49
CBLN3-202ENST00000555436 IPO8O15397 1037 aaKnown RBP24.32■■□□□ 1.48
CBLN3-202ENST00000555436 CA12O43570 354 aa24.32■■□□□ 1.48
CBLN3-202ENST00000555436 PUM3Q15397 648 aaKnown RBP24.32■■□□□ 1.48
CBLN3-202ENST00000555436 CFAP100Q494V2 611 aa24.32■■□□□ 1.48
CBLN3-202ENST00000555436 CAVIN4Q5BKX8 364 aa24.32■■□□□ 1.48
CBLN3-202ENST00000555436 LRRFIP2Q9Y608 721 aaKnown RBP24.32■■□□□ 1.48
CBLN3-202ENST00000555436 SPDYE2BA6NHP3 402 aa24.31■■□□□ 1.48
CBLN3-202ENST00000555436 SPDYE6P0CI01 402 aa24.31■■□□□ 1.48
CBLN3-202ENST00000555436 FGFR2P21802 821 aa24.31■■□□□ 1.48
CBLN3-202ENST00000555436 MEIS3Q99687 375 aa24.31■■□□□ 1.48
CBLN3-202ENST00000555436 PCDHAC2Q9Y5I4 1007 aa24.31■■□□□ 1.48
CBLN3-202ENST00000555436 PAPPA2Q9BXP8 1791 aa24.3■■□□□ 1.48
CBLN3-202ENST00000555436 SLC10A3P09131 477 aa24.3■■□□□ 1.48
CBLN3-202ENST00000555436 NF2P35240 595 aa24.3■■□□□ 1.48
CBLN3-202ENST00000555436 ATG9AQ7Z3C6 839 aa24.3■■□□□ 1.48
CBLN3-202ENST00000555436 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
CBLN3-202ENST00000555436 MYO1BO43795 1136 aa24.29■■□□□ 1.48
CBLN3-202ENST00000555436 BCAR3O75815 825 aa24.29■■□□□ 1.48
CBLN3-202ENST00000555436 IFIT1P09914 478 aaKnown RBP24.29■■□□□ 1.48
CBLN3-202ENST00000555436 TRIM27P14373 513 aa24.29■■□□□ 1.48
CBLN3-202ENST00000555436 MOB2Q70IA6 237 aa24.29■■□□□ 1.48
CBLN3-202ENST00000555436 PRMT6Q96LA8 375 aaPredicted RBP24.29■■□□□ 1.48
CBLN3-202ENST00000555436 IQSEC3Q9UPP2 1182 aaPredicted RBP24.29■■□□□ 1.48
CBLN3-202ENST00000555436 COL1A1P02452 1464 aaPredicted RBP24.28■■□□□ 1.48
CBLN3-202ENST00000555436 CIAO1O76071 339 aa24.28■■□□□ 1.48
CBLN3-202ENST00000555436 BCAMP50895 628 aa24.28■■□□□ 1.48
CBLN3-202ENST00000555436 KIF23Q02241 960 aaPredicted RBP24.28■■□□□ 1.48
CBLN3-202ENST00000555436 ATF7IPQ6VMQ6 1270 aa24.28■■□□□ 1.48
CBLN3-202ENST00000555436 DEFB129Q9H1M3 183 aa24.28■■□□□ 1.48
CBLN3-202ENST00000555436 SERPINA10Q9UK55 444 aa24.28■■□□□ 1.48
CBLN3-202ENST00000555436 TTF2Q9UNY4 1162 aaKnown RBP24.28■■□□□ 1.48
CBLN3-202ENST00000555436 UBE2Q2LH0YL09 131 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 FRAT2O75474 233 aaPredicted RBP24.27■■□□□ 1.48
CBLN3-202ENST00000555436 GNAI3P08754 354 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 RBM5P52756 815 aaKnown RBP eCLIP24.27■■□□□ 1.48
CBLN3-202ENST00000555436 TTLL12Q14166 644 aaPredicted RBP24.27■■□□□ 1.48
CBLN3-202ENST00000555436 RASAL3Q86YV0 1011 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 LPIN2Q92539 896 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 FRAT1Q92837 279 aaPredicted RBP24.27■■□□□ 1.48
CBLN3-202ENST00000555436 SIL1Q9H173 461 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 TSKSQ9UJT2 592 aa24.27■■□□□ 1.48
CBLN3-202ENST00000555436 CLRN2A0PK11 232 aa24.26■■□□□ 1.47
CBLN3-202ENST00000555436 SLC5A1P13866 664 aa24.26■■□□□ 1.47
CBLN3-202ENST00000555436 CHAF1AQ13111 956 aaPredicted RBP24.26■■□□□ 1.47
CBLN3-202ENST00000555436 TBC1D22AQ8WUA7 517 aa24.26■■□□□ 1.47
CBLN3-202ENST00000555436 PPP2R3BQ9Y5P8 575 aa24.26■■□□□ 1.47
CBLN3-202ENST00000555436 COPRSQ9NQ92 184 aa24.25■■□□□ 1.47
CBLN3-202ENST00000555436 AOX1Q06278 1338 aa24.25■■□□□ 1.47
CBLN3-202ENST00000555436 IL15P40933 162 aaPredicted RBP24.24■■□□□ 1.47
CBLN3-202ENST00000555436 CEP126Q9P2H0 1117 aa24.24■■□□□ 1.47
CBLN3-202ENST00000555436 GRIK5Q16478 980 aa24.23■■□□□ 1.47
CBLN3-202ENST00000555436 ARMC9Q7Z3E5 817 aa24.23■■□□□ 1.47
CBLN3-202ENST00000555436 VEZTQ9HBM0 779 aa24.23■■□□□ 1.47
CBLN3-202ENST00000555436 PA2G4Q9UQ80 394 aaKnown RBP24.23■■□□□ 1.47
CBLN3-202ENST00000555436 TNNQ9UQP3 1299 aa24.23■■□□□ 1.47
CBLN3-202ENST00000555436 CRKP46108 304 aa24.22■■□□□ 1.47
CBLN3-202ENST00000555436 HDLBPQ00341 1268 aaKnown RBP24.22■■□□□ 1.47
CBLN3-202ENST00000555436 MTX1Q13505 466 aa24.22■■□□□ 1.47
CBLN3-202ENST00000555436 SPDYE2Q495Y8 402 aa24.22■■□□□ 1.47
CBLN3-202ENST00000555436 REM2Q8IYK8 340 aaPredicted RBP24.22■■□□□ 1.47
CBLN3-202ENST00000555436 DZIP1LQ8IYY4 767 aaKnown RBP24.22■■□□□ 1.47
CBLN3-202ENST00000555436 CSRNP1Q96S65 589 aa24.22■■□□□ 1.47
CBLN3-202ENST00000555436 SAGE1Q9NXZ1 904 aa24.22■■□□□ 1.47
CBLN3-202ENST00000555436 PRKG1Q13976 671 aa24.21■■□□□ 1.47
CBLN3-202ENST00000555436 ATP2B3Q16720 1220 aa24.21■■□□□ 1.47
CBLN3-202ENST00000555436 ZKSCAN2Q63HK3 967 aa24.21■■□□□ 1.47
CBLN3-202ENST00000555436 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms