RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ZNF541Q9H0D2 1346 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 GLTPD2A6NH11 291 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 PSMD14O00487 310 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 RAD17O75943 681 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 ATP5JP18859 108 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 RASGRF1Q13972 1273 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 TTC39AQ5SRH9 613 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 HMG20BQ9P0W2 317 aa15.52■□□□□ 0.08
SYNE2-219ENST00000555323 TTC41PQ6P2S7 1318 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 SALL1Q9NSC2 1324 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 FRAT2O75474 233 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-219ENST00000555323 MCAMP43121 646 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 SCARF1Q14162 830 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 RSBN1LQ6PCB5 846 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-219ENST00000555323 AGBL3Q8NEM8 1001 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 WDR66Q8TBY9 1149 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 OTUD7AQ8TE49 926 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-219ENST00000555323 TBC1D22AQ8WUA7 517 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 GMLQ99445 158 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 OSBPL3Q9H4L5 887 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 IQSEC3Q9UPP2 1182 aaPredicted RBP15.51■□□□□ 0.07
SYNE2-219ENST00000555323 CHD4Q14839 1912 aa15.51■□□□□ 0.07
SYNE2-219ENST00000555323 IGSF3O75054 1194 aa15.5■□□□□ 0.07
SYNE2-219ENST00000555323 DDNO94850 711 aaPredicted RBP15.5■□□□□ 0.07
SYNE2-219ENST00000555323 RPS12P25398 132 aaKnown RBP15.5■□□□□ 0.07
SYNE2-219ENST00000555323 MMP14P50281 582 aa15.5■□□□□ 0.07
SYNE2-219ENST00000555323 SPATA5Q8NB90 893 aa15.5■□□□□ 0.07
SYNE2-219ENST00000555323 DPF2Q92785 391 aa15.5■□□□□ 0.07
SYNE2-219ENST00000555323 SUGT1Q9Y2Z0 365 aa15.5■□□□□ 0.07
SYNE2-219ENST00000555323 SCN9AQ15858 1988 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 MYO3BQ8WXR4 1341 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 MX1P20591 662 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 PDE1AP54750 535 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 PLEKHM2Q8IWE5 1019 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 CERS5Q8N5B7 392 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
SYNE2-219ENST00000555323 L3MBTL3Q96JM7 780 aaPredicted RBP15.49■□□□□ 0.07
SYNE2-219ENST00000555323 PDE4AP27815 886 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 MFSD14BQ5SR56 506 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 PI4K2BQ8TCG2 481 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 HAUS7Q99871 368 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 MRIQ9BWK5 157 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
SYNE2-219ENST00000555323 AOX1Q06278 1338 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 COL1A1P02452 1464 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 ERC2O15083 957 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 GLRX3O76003 335 aaKnown RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 CYP2E1P05181 493 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 ZAP70P43403 619 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 SCNN1DP51172 638 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 CHAF1AQ13111 956 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 PI16Q6UXB8 463 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 ZGPATQ8N5A5 531 aaKnown RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 BOLA2Q9H3K6 86 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
SYNE2-219ENST00000555323 GJA3Q9Y6H8 435 aa15.47■□□□□ 0.07
SYNE2-219ENST00000555323 SNRKQ9NRH2 765 aa15.46■□□□□ 0.07
SYNE2-219ENST00000555323 JAG2Q9Y219 1238 aa15.46■□□□□ 0.07
SYNE2-219ENST00000555323 PSME4Q14997 1843 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 POTECB2RU33 542 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 GMPSP49915 693 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-219ENST00000555323 ZNF280AP59817 542 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-219ENST00000555323 HDLBPQ00341 1268 aaKnown RBP15.45■□□□□ 0.06
SYNE2-219ENST00000555323 TTF1Q15361 905 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-219ENST00000555323 GRIK5Q16478 980 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 SPTY2D1Q68D10 685 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-219ENST00000555323 FBXW7Q969H0 707 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 GPRC5DQ9NZD1 345 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 TIAM2Q8IVF5 1701 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 AKAP11Q9UKA4 1901 aa15.45■□□□□ 0.06
SYNE2-219ENST00000555323 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
SYNE2-219ENST00000555323 TSHZ3Q63HK5 1081 aa15.44■□□□□ 0.06
SYNE2-219ENST00000555323 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
SYNE2-219ENST00000555323 ANTXR1Q9H6X2 564 aa15.44■□□□□ 0.06
SYNE2-219ENST00000555323 CNOT7Q9UIV1 285 aaKnown RBP15.44■□□□□ 0.06
SYNE2-219ENST00000555323 ZNF646O15015 1829 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-219ENST00000555323 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
SYNE2-219ENST00000555323 PRDX5P30044 214 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 TMED8Q6PL24 325 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-219ENST00000555323 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 OGFOD1Q8N543 542 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 FAM163AQ96GL9 167 aaPredicted RBP15.43■□□□□ 0.06
SYNE2-219ENST00000555323 PIH1D3Q9NQM4 214 aaKnown RBP15.43■□□□□ 0.06
SYNE2-219ENST00000555323 PAG1Q9NWQ8 432 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 ABCF2Q9UG63 623 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 GTF3C3Q9Y5Q9 886 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 NDUFB9Q9Y6M9 179 aa15.43■□□□□ 0.06
SYNE2-219ENST00000555323 IQCA1LA6NCM1 817 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 H7C1D1 291 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 GOLIM4O00461 696 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 EPS15P42566 896 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 TICAM2Q86XR7 235 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 MTMR14Q8NCE2 650 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 SERPINA10Q9UK55 444 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
SYNE2-219ENST00000555323 TTF2Q9UNY4 1162 aaKnown RBP15.42■□□□□ 0.06
SYNE2-219ENST00000555323 MAST3O60307 1309 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms