RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 RAD17O75943 681 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 IFIT1P09914 478 aaKnown RBP21.39■■□□□ 1.01
PSEN1-212ENST00000555254 VEGFAP15692 232 aaPredicted RBP21.39■■□□□ 1.01
PSEN1-212ENST00000555254 TTC39AQ5SRH9 613 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 EVI5LQ96CN4 794 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 XAGE2Q96GT9 111 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 BOLA2Q9H3K6 86 aa21.39■■□□□ 1.01
PSEN1-212ENST00000555254 ZNF609O15014 1411 aa21.38■■□□□ 1.01
PSEN1-212ENST00000555254 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
PSEN1-212ENST00000555254 MAP4K4O95819 1239 aaPredicted RBP21.38■■□□□ 1.01
PSEN1-212ENST00000555254 CXCL9Q07325 125 aa21.38■■□□□ 1.01
PSEN1-212ENST00000555254 LEMD3Q9Y2U8 911 aa21.38■■□□□ 1.01
PSEN1-212ENST00000555254 DUOX1Q9NRD9 1551 aa21.37■■□□□ 1.01
PSEN1-212ENST00000555254 ECE2O60344 883 aa21.37■■□□□ 1.01
PSEN1-212ENST00000555254 GPC2Q8N158 579 aa21.37■■□□□ 1.01
PSEN1-212ENST00000555254 VGLL2Q8N8G2 317 aa21.37■■□□□ 1.01
PSEN1-212ENST00000555254 LRRC37AA6NMS7 1700 aa21.37■■□□□ 1.01
PSEN1-212ENST00000555254 ZNF804BA4D1E1 1349 aa21.36■■□□□ 1.01
PSEN1-212ENST00000555254 YDJCA8MPS7 323 aa21.36■■□□□ 1.01
PSEN1-212ENST00000555254 POTECB2RU33 542 aa21.36■■□□□ 1.01
PSEN1-212ENST00000555254 SNAP23O00161 211 aa21.36■■□□□ 1.01
PSEN1-212ENST00000555254 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.36■■□□□ 1.01
PSEN1-212ENST00000555254 HIP1O00291 1037 aa21.35■■□□□ 1.01
PSEN1-212ENST00000555254 UQCRFS1P1P0C7P4 283 aa21.35■■□□□ 1.01
PSEN1-212ENST00000555254 MFAP1P55081 439 aaKnown RBP21.35■■□□□ 1.01
PSEN1-212ENST00000555254 TNIP1Q15025 636 aa21.35■■□□□ 1.01
PSEN1-212ENST00000555254 CIAPIN1Q6FI81 312 aa21.35■■□□□ 1.01
PSEN1-212ENST00000555254 KCNQ5Q9NR82 932 aa21.35■■□□□ 1.01
PSEN1-212ENST00000555254 FGFR2P21802 821 aa21.34■■□□□ 1.01
PSEN1-212ENST00000555254 ADORA1P30542 326 aa21.34■■□□□ 1.01
PSEN1-212ENST00000555254 UBE4AQ14139 1066 aa21.34■■□□□ 1.01
PSEN1-212ENST00000555254 HAUS7Q99871 368 aa21.34■■□□□ 1.01
PSEN1-212ENST00000555254 IQCA1LA6NCM1 817 aa21.33■■□□□ 1.01
PSEN1-212ENST00000555254 KLRK1P26718 216 aa21.33■■□□□ 1.01
PSEN1-212ENST00000555254 RUFY2Q8WXA3 655 aa21.33■■□□□ 1.01
PSEN1-212ENST00000555254 L3MBTL3Q96JM7 780 aaPredicted RBP21.33■■□□□ 1.01
PSEN1-212ENST00000555254 DNAJC2Q99543 621 aaKnown RBP21.33■■□□□ 1.01
PSEN1-212ENST00000555254 DIAPH3Q9NSV4 1193 aa21.33■■□□□ 1.01
PSEN1-212ENST00000555254 DICER1Q9UPY3 1922 aaKnown RBP21.33■■□□□ 1
PSEN1-212ENST00000555254 CHMLP26374 656 aa21.32■■□□□ 1
PSEN1-212ENST00000555254 TXNRD3Q86VQ6 643 aa21.32■■□□□ 1
PSEN1-212ENST00000555254 FSD1Q9BTV5 496 aa21.32■■□□□ 1
PSEN1-212ENST00000555254 GNL3LQ9NVN8 582 aaKnown RBP21.32■■□□□ 1
PSEN1-212ENST00000555254 HACL1Q9UJ83 578 aa21.32■■□□□ 1
PSEN1-212ENST00000555254 REC8O95072 547 aa21.31■■□□□ 1
PSEN1-212ENST00000555254 SEC24BO95487 1268 aa21.31■■□□□ 1
PSEN1-212ENST00000555254 LMOD1P29536 600 aaPredicted RBP21.31■■□□□ 1
PSEN1-212ENST00000555254 GMPSP49915 693 aaPredicted RBP21.31■■□□□ 1
PSEN1-212ENST00000555254 LRRFIP1Q32MZ4 808 aaKnown RBP21.31■■□□□ 1
PSEN1-212ENST00000555254 ZNF512BQ96KM6 892 aaPredicted RBP21.31■■□□□ 1
PSEN1-212ENST00000555254 MED23Q9ULK4 1368 aa21.31■■□□□ 1
PSEN1-212ENST00000555254 SPEF2Q9C093 1822 aa21.31■■□□□ 1
PSEN1-212ENST00000555254 PSMD14O00487 310 aa21.3■■□□□ 1
PSEN1-212ENST00000555254 HSPA1AP0DMV8 641 aaKnown RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 HSPA1BP0DMV9 641 aaKnown RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 ANP32AP39687 249 aaKnown RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 EAPPQ56P03 285 aaPredicted RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 CAVIN4Q5BKX8 364 aa21.3■■□□□ 1
PSEN1-212ENST00000555254 TICAM2Q86XR7 235 aa21.3■■□□□ 1
PSEN1-212ENST00000555254 RBM46Q8TBY0 533 aaKnown RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 FBXW7Q969H0 707 aa21.3■■□□□ 1
PSEN1-212ENST00000555254 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
PSEN1-212ENST00000555254 LTBP1Q14766 1721 aa21.29■■□□□ 1
PSEN1-212ENST00000555254 CCDC102BQ68D86 513 aa21.29■■□□□ 1
PSEN1-212ENST00000555254 VPS37DQ86XT2 251 aa21.29■■□□□ 1
PSEN1-212ENST00000555254 PAG1Q9NWQ8 432 aa21.29■■□□□ 1
PSEN1-212ENST00000555254 ZBTB12Q9Y330 459 aaPredicted RBP21.29■■□□□ 1
PSEN1-212ENST00000555254 EPHX2P34913 555 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 EPS15P42566 896 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 SCNN1DP51172 638 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 PODNQ7Z5L7 613 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 ESYT1Q9BSJ8 1104 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 COA1Q9GZY4 146 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 CLEC11AQ9Y240 323 aa21.28■■□□□ 1
PSEN1-212ENST00000555254 GOLIM4O00461 696 aa21.27■■□□□ 1
PSEN1-212ENST00000555254 USP17L3A6NCW0 530 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 USP17L4A6NCW7 530 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 POTEIP0CG38 1075 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 POTEJP0CG39 1038 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 PHKA1P46020 1223 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
PSEN1-212ENST00000555254 KIAA1211Q6ZU35 1233 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 USP17L1Q7RTZ2 530 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 C22orf23Q9BZE7 217 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 GPRC5DQ9NZD1 345 aa21.26■□□□□ 0.99
PSEN1-212ENST00000555254 ARID4AP29374 1257 aaPredicted RBP21.25■□□□□ 0.99
PSEN1-212ENST00000555254 ZNF804AQ7Z570 1209 aa21.25■□□□□ 0.99
PSEN1-212ENST00000555254 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
PSEN1-212ENST00000555254 SNRKQ9NRH2 765 aa21.25■□□□□ 0.99
PSEN1-212ENST00000555254 CNOT7Q9UIV1 285 aaKnown RBP21.25■□□□□ 0.99
PSEN1-212ENST00000555254 SHTN1A0MZ66 631 aa21.24■□□□□ 0.99
PSEN1-212ENST00000555254 VIL1P09327 827 aaKnown RBP21.24■□□□□ 0.99
PSEN1-212ENST00000555254 GYG1P46976 350 aa21.24■□□□□ 0.99
PSEN1-212ENST00000555254 BCAMP50895 628 aa21.24■□□□□ 0.99
PSEN1-212ENST00000555254 C15orf52Q6ZUT6 534 aaKnown RBP21.24■□□□□ 0.99
PSEN1-212ENST00000555254 PNMA8AQ86V59 439 aaPredicted RBP21.24■□□□□ 0.99
PSEN1-212ENST00000555254 SMC1BQ8NDV3 1235 aa21.24■□□□□ 0.99
PSEN1-212ENST00000555254 CD209Q9NNX6 404 aa21.24■□□□□ 0.99
PSEN1-212ENST00000555254 RFX7Q2KHR2 1363 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms