RNA–Protein interactions for RNA: ENST00000555241.5

SYNE2-218, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-218ENST00000555241 TDRD7Q8NHU6 1098 aaKnown RBP26.93■■□□□ 1.9
SYNE2-218ENST00000555241 FAM84BQ96KN1 310 aaPredicted RBP26.93■■□□□ 1.9
SYNE2-218ENST00000555241 MEIS3Q99687 375 aa26.93■■□□□ 1.9
SYNE2-218ENST00000555241 LRRFIP2Q9Y608 721 aaKnown RBP26.93■■□□□ 1.9
SYNE2-218ENST00000555241 EYA2O00167 538 aa26.92■■□□□ 1.9
SYNE2-218ENST00000555241 FRAT1Q92837 279 aaPredicted RBP26.92■■□□□ 1.9
SYNE2-218ENST00000555241 FAM205AQ6ZU69 1335 aa26.91■■□□□ 1.9
SYNE2-218ENST00000555241 CDCA5Q96FF9 252 aa26.91■■□□□ 1.9
SYNE2-218ENST00000555241 GBA2Q9HCG7 927 aaPredicted RBP26.91■■□□□ 1.9
SYNE2-218ENST00000555241 FBXO3Q9UK99 471 aa26.91■■□□□ 1.9
SYNE2-218ENST00000555241 GNAI3P08754 354 aa26.9■■□□□ 1.9
SYNE2-218ENST00000555241 HUNKP57058 714 aa26.89■■□□□ 1.9
SYNE2-218ENST00000555241 PUM3Q15397 648 aaKnown RBP26.89■■□□□ 1.9
SYNE2-218ENST00000555241 FBXO33Q7Z6M2 555 aa26.89■■□□□ 1.9
SYNE2-218ENST00000555241 VPS37DQ86XT2 251 aa26.89■■□□□ 1.9
SYNE2-218ENST00000555241 C2orf69Q8N8R5 385 aa26.89■■□□□ 1.9
SYNE2-218ENST00000555241 ZBED3Q96IU2 234 aaPredicted RBP26.89■■□□□ 1.9
SYNE2-218ENST00000555241 WBP1LQ9NX94 342 aa26.89■■□□□ 1.9
SYNE2-218ENST00000555241 PAPPA2Q9BXP8 1791 aa26.89■■□□□ 1.89
SYNE2-218ENST00000555241 MAP2K1Q02750 393 aaPredicted RBP26.88■■□□□ 1.89
SYNE2-218ENST00000555241 GRM1Q13255 1194 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 CAVIN4Q5BKX8 364 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 ZKSCAN2Q63HK3 967 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 MTMR14Q8NCE2 650 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 AIDAQ96BJ3 306 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 JAG2Q9Y219 1238 aa26.88■■□□□ 1.89
SYNE2-218ENST00000555241 CIAO1O76071 339 aa26.87■■□□□ 1.89
SYNE2-218ENST00000555241 FGFR2P21802 821 aa26.87■■□□□ 1.89
SYNE2-218ENST00000555241 ATG9AQ7Z3C6 839 aa26.87■■□□□ 1.89
SYNE2-218ENST00000555241 F8W031 263 aaPredicted RBP26.86■■□□□ 1.89
SYNE2-218ENST00000555241 IFIT1P09914 478 aaKnown RBP26.86■■□□□ 1.89
SYNE2-218ENST00000555241 MAP2K2P36507 400 aa26.86■■□□□ 1.89
SYNE2-218ENST00000555241 DLGAP5Q15398 846 aa26.86■■□□□ 1.89
SYNE2-218ENST00000555241 MFSD14BQ5SR56 506 aa26.86■■□□□ 1.89
SYNE2-218ENST00000555241 TNNQ9UQP3 1299 aa26.86■■□□□ 1.89
SYNE2-218ENST00000555241 FOXN1O15353 648 aa26.85■■□□□ 1.89
SYNE2-218ENST00000555241 APOBEC3FQ8IUX4 373 aaKnown RBP26.85■■□□□ 1.89
SYNE2-218ENST00000555241 CLUAP1Q96AJ1 413 aa26.85■■□□□ 1.89
SYNE2-218ENST00000555241 LPIN2Q92539 896 aa26.84■■□□□ 1.89
SYNE2-218ENST00000555241 SIL1Q9H173 461 aa26.84■■□□□ 1.89
SYNE2-218ENST00000555241 COPRSQ9NQ92 184 aa26.84■■□□□ 1.89
SYNE2-218ENST00000555241 SCAF8Q9UPN6 1271 aaKnown RBP26.84■■□□□ 1.89
SYNE2-218ENST00000555241 COL1A1P02452 1464 aaPredicted RBP26.83■■□□□ 1.89
SYNE2-218ENST00000555241 SLC5A1P13866 664 aa26.83■■□□□ 1.89
SYNE2-218ENST00000555241 FKBP1BP68106 108 aa26.83■■□□□ 1.89
SYNE2-218ENST00000555241 MTX1Q13505 466 aa26.83■■□□□ 1.89
SYNE2-218ENST00000555241 CFAP100Q494V2 611 aa26.83■■□□□ 1.89
SYNE2-218ENST00000555241 COL13A1Q5TAT6 717 aaPredicted RBP26.83■■□□□ 1.89
SYNE2-218ENST00000555241 RGMBQ6NW40 437 aa26.83■■□□□ 1.89
SYNE2-218ENST00000555241 AOC2O75106 756 aa26.82■■□□□ 1.88
SYNE2-218ENST00000555241 IL15P40933 162 aaPredicted RBP26.82■■□□□ 1.88
SYNE2-218ENST00000555241 SPDYE2BA6NHP3 402 aa26.81■■□□□ 1.88
SYNE2-218ENST00000555241 FRAT2O75474 233 aaPredicted RBP26.81■■□□□ 1.88
SYNE2-218ENST00000555241 SPDYE6P0CI01 402 aa26.81■■□□□ 1.88
SYNE2-218ENST00000555241 CTCFP49711 727 aaPredicted RBP26.81■■□□□ 1.88
SYNE2-218ENST00000555241 BCAMP50895 628 aa26.81■■□□□ 1.88
SYNE2-218ENST00000555241 TBC1D22AQ8WUA7 517 aa26.81■■□□□ 1.88
SYNE2-218ENST00000555241 CEP126Q9P2H0 1117 aa26.81■■□□□ 1.88
SYNE2-218ENST00000555241 TTF2Q9UNY4 1162 aaKnown RBP26.81■■□□□ 1.88
SYNE2-218ENST00000555241 IQSEC3Q9UPP2 1182 aaPredicted RBP26.81■■□□□ 1.88
SYNE2-218ENST00000555241 PA2G4Q9UQ80 394 aaKnown RBP26.81■■□□□ 1.88
SYNE2-218ENST00000555241 SRGAP3O43295 1099 aa26.8■■□□□ 1.88
SYNE2-218ENST00000555241 MYO1BO43795 1136 aa26.8■■□□□ 1.88
SYNE2-218ENST00000555241 GNAI2P04899 355 aa26.8■■□□□ 1.88
SYNE2-218ENST00000555241 NOGQ13253 232 aa26.8■■□□□ 1.88
SYNE2-218ENST00000555241 TMEM57Q8N5G2 664 aa26.8■■□□□ 1.88
SYNE2-218ENST00000555241 CCDC102AQ96A19 550 aa26.79■■□□□ 1.88
SYNE2-218ENST00000555241 PRMT6Q96LA8 375 aaPredicted RBP26.79■■□□□ 1.88
SYNE2-218ENST00000555241 BEGAINQ9BUH8 593 aa26.79■■□□□ 1.88
SYNE2-218ENST00000555241 SERPINA10Q9UK55 444 aa26.79■■□□□ 1.88
SYNE2-218ENST00000555241 PCDHAC2Q9Y5I4 1007 aa26.79■■□□□ 1.88
SYNE2-218ENST00000555241 AKAP11Q9UKA4 1901 aa26.78■■□□□ 1.88
SYNE2-218ENST00000555241 NF2P35240 595 aa26.78■■□□□ 1.88
SYNE2-218ENST00000555241 RBM5P52756 815 aaKnown RBP eCLIP26.78■■□□□ 1.88
SYNE2-218ENST00000555241 CHAF1AQ13111 956 aaPredicted RBP26.78■■□□□ 1.88
SYNE2-218ENST00000555241 ATP2B3Q16720 1220 aa26.78■■□□□ 1.88
SYNE2-218ENST00000555241 PRAMEF18Q5VWM3 479 aa26.78■■□□□ 1.88
SYNE2-218ENST00000555241 ZNF157P51786 506 aaPredicted RBP26.77■■□□□ 1.88
SYNE2-218ENST00000555241 IFFO2Q5TF58 517 aa26.77■■□□□ 1.88
SYNE2-218ENST00000555241 FTSJ3Q8IY81 847 aaKnown RBP26.77■■□□□ 1.88
SYNE2-218ENST00000555241 PRDM10Q9NQV6 1147 aa26.77■■□□□ 1.88
SYNE2-218ENST00000555241 FAM155AB1AL88 458 aaPredicted RBP26.76■■□□□ 1.87
SYNE2-218ENST00000555241 PPP2R3BQ9Y5P8 575 aa26.76■■□□□ 1.87
SYNE2-218ENST00000555241 DZIP1LQ8IYY4 767 aaKnown RBP26.75■■□□□ 1.87
SYNE2-218ENST00000555241 DEFB129Q9H1M3 183 aa26.75■■□□□ 1.87
SYNE2-218ENST00000555241 CLRN2A0PK11 232 aa26.74■■□□□ 1.87
SYNE2-218ENST00000555241 SLC10A3P09131 477 aa26.74■■□□□ 1.87
SYNE2-218ENST00000555241 HDLBPQ00341 1268 aaKnown RBP26.74■■□□□ 1.87
SYNE2-218ENST00000555241 SUGT1Q9Y2Z0 365 aa26.74■■□□□ 1.87
SYNE2-218ENST00000555241 AOX1Q06278 1338 aa26.73■■□□□ 1.87
SYNE2-218ENST00000555241 HSPA8P11142 646 aaKnown RBP26.73■■□□□ 1.87
SYNE2-218ENST00000555241 CRKP46108 304 aa26.73■■□□□ 1.87
SYNE2-218ENST00000555241 GRIK5Q16478 980 aa26.73■■□□□ 1.87
SYNE2-218ENST00000555241 VEZTQ9HBM0 779 aa26.73■■□□□ 1.87
SYNE2-218ENST00000555241 CA12O43570 354 aa26.72■■□□□ 1.87
SYNE2-218ENST00000555241 LBX1P52954 281 aa26.72■■□□□ 1.87
SYNE2-218ENST00000555241 TTLL12Q14166 644 aaPredicted RBP26.72■■□□□ 1.87
SYNE2-218ENST00000555241 MOB2Q70IA6 237 aa26.72■■□□□ 1.87
SYNE2-218ENST00000555241 WDR66Q8TBY9 1149 aa26.72■■□□□ 1.87
SYNE2-218ENST00000555241 ZIC5Q96T25 663 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms