RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 NOS3P29474 1203 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 GRIA4P48058 902 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 ENOX2Q16206 610 aaKnown RBP5.5□□□□□ -1.53
SCFD1-213ENST00000554776 CCDC27Q2M243 656 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 PRPF40BQ6NWY9 871 aaKnown RBP5.5□□□□□ -1.53
SCFD1-213ENST00000554776 WFDC12Q8WWY7 111 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 KLHDC7BQ96G42 594 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 EHD4Q9H223 541 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 KCNK4Q9NYG8 393 aa5.5□□□□□ -1.53
SCFD1-213ENST00000554776 A0A096LPE4 126 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 PNMA6FA0A0J9YX94 578 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 A0A1W2PPZ6 126 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 F8W735 103 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 SOX1O00570 391 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 ADAM11O75078 769 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 WISP1O95388 367 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 IKBKEQ14164 716 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 DOC2BQ14184 412 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 SUZ12Q15022 739 aaKnown RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 EPS8L3Q8TE67 593 aaKnown RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 FOXD4L4Q8WXT5 416 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 SSBP4Q9BWG4 385 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 SOX17Q9H6I2 414 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-213ENST00000554776 AKTIPQ9H8T0 292 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 TPSG1Q9NRR2 321 aa5.49□□□□□ -1.53
SCFD1-213ENST00000554776 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 ANKRD33BA6NCL7 494 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 GADD45BO75293 160 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-213ENST00000554776 P4HBP07237 508 aaKnown RBP5.48□□□□□ -1.53
SCFD1-213ENST00000554776 ESRRAP11474 423 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-213ENST00000554776 ITPKAP23677 461 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 IREB2P48200 963 aaKnown RBP5.48□□□□□ -1.53
SCFD1-213ENST00000554776 ARL4DP49703 201 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 C19orf57Q0VDD7 668 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 GRM2Q14416 872 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 SPRED3Q2MJR0 410 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 TMCO4Q5TGY1 634 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 Q6ZS46 218 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 NPAS4Q8IUM7 802 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 GLIS3Q8NEA6 775 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 SLC7A3Q8WY07 619 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 CLEC4MQ9H2X3 399 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-213ENST00000554776 ABCB6Q9NP58 842 aa5.48□□□□□ -1.53
SCFD1-213ENST00000554776 DDX3YO15523 660 aaKnown RBP5.47□□□□□ -1.53
SCFD1-213ENST00000554776 ALX3O95076 343 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 PTPN12Q05209 780 aaKnown RBP5.47□□□□□ -1.53
SCFD1-213ENST00000554776 PCDH1Q08174 1060 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 PI16Q6UXB8 463 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 FBF1Q8TES7 1133 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 MEGF10Q96KG7 1140 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 ZNF576Q9H609 170 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 TRAK1Q9UPV9 953 aa5.47□□□□□ -1.53
SCFD1-213ENST00000554776 TMEM238LA0A1B0GVL6 79 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 FURINP09958 794 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 MAPK8P45983 427 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 COL19A1Q14993 1142 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 DUOXA2Q1HG44 320 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 RSPO4Q2I0M5 234 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-213ENST00000554776 ZNF423Q2M1K9 1284 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 NKAPLQ5M9Q1 402 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 KIAA1211Q6ZU35 1233 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 ACAD11Q709F0 780 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 DZIP1LQ8IYY4 767 aaKnown RBP5.46□□□□□ -1.54
SCFD1-213ENST00000554776 AGGF1Q8N302 714 aaeCLIP5.46□□□□□ -1.54
SCFD1-213ENST00000554776 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 NLRP2Q9NX02 1062 aa5.46□□□□□ -1.54
SCFD1-213ENST00000554776 CCDC9Q9Y3X0 531 aaKnown RBP5.46□□□□□ -1.54
SCFD1-213ENST00000554776 EIF4EBP3O60516 100 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-213ENST00000554776 ADAM23O75077 832 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 B3GALT4O96024 378 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 MFAP1P55081 439 aaKnown RBP5.45□□□□□ -1.54
SCFD1-213ENST00000554776 NLRP12P59046 1061 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCFD1-213ENST00000554776 ALG1LQ6GMV1 187 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 FBXO33Q7Z6M2 555 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 SETDB2Q96T68 719 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 BCO2Q9BYV7 579 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 NRSN2Q9GZP1 204 aa5.45□□□□□ -1.54
SCFD1-213ENST00000554776 K7ELQ4 463 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-213ENST00000554776 H2AFB1P0C5Y9 115 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 H2AFB2P0C5Z0 115 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 ERCC3P19447 782 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 GSTM4Q03013 218 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 RPS26P11Q5JNZ5 115 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-213ENST00000554776 TP53INP1Q96A56 240 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 WWC3Q9ULE0 1092 aa5.44□□□□□ -1.54
SCFD1-213ENST00000554776 LOC100289279A0A1B0GTE1 492 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 MEGF11A6BM72 1044 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 DYRK3O43781 588 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
SCFD1-213ENST00000554776 GLB1P16278 677 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 ATP2B2Q01814 1243 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 NXPE4Q6UWF7 544 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 UBL7Q96S82 380 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-213ENST00000554776 CEP41Q9BYV8 373 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 RNF208Q9H0X6 261 aa5.43□□□□□ -1.54
SCFD1-213ENST00000554776 PPP4R2Q9NY27 417 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms