RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 GLMNQ92990 594 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 KIFC2Q96AC6 838 aa7.43□□□□□ -1.22
ATXN3-230ENST00000554673 CALR3Q96L12 384 aaKnown RBP7.43□□□□□ -1.22
ATXN3-230ENST00000554673 DDX21Q9NR30 783 aaKnown RBP eCLIP7.43□□□□□ -1.22
ATXN3-230ENST00000554673 PI4KAP2A4QPH2 592 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 POM121CA8CG34 1229 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 DDB1Q16531 1140 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 MSS51Q4VC12 460 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 CCDC30Q5VVM6 783 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 CEP85Q6P2H3 762 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 ITPRIPQ8IWB1 547 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 SMC5Q8IY18 1101 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 SYNE4Q8N205 404 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 ANKRD44Q8N8A2 993 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 PI4KAP1Q8N8J0 262 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 LINC00116Q8NCU8 138 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 PBXIP1Q96AQ6 731 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 LRRC4BQ9NT99 713 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 ZBTB1Q9Y2K1 713 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 PTPRCP08575 1304 aa7.42□□□□□ -1.22
ATXN3-230ENST00000554673 SOS1Q07889 1333 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-230ENST00000554673 RGPD3A6NKT7 1758 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-230ENST00000554673 RGPD4Q7Z3J3 1758 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 EXOC5O00471 708 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 MYL6BP14649 208 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 HLFQ16534 295 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 COPS6Q7L5N1 327 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 SEPT12Q8IYM1 358 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 CCDC136Q96JN2 1154 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 TBC1D2Q9BYX2 928 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 TMOD3Q9NYL9 352 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 LIMD1Q9UGP4 676 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 MAP3K2Q9Y2U5 619 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 UTYO14607 1347 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 SALL3Q9BXA9 1300 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 PALLDQ8WX93 1383 aa7.41□□□□□ -1.22
ATXN3-230ENST00000554673 HSP90AB1P08238 724 aaKnown RBP7.4□□□□□ -1.22
ATXN3-230ENST00000554673 SNRPA1P09661 255 aaKnown RBP7.4□□□□□ -1.22
ATXN3-230ENST00000554673 VEGFBP49765 207 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 HDAC1Q13547 482 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-230ENST00000554673 TUSC1Q2TAM9 212 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 GRIPAP1Q4V328 841 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 SULF1Q8IWU6 871 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 SUCLG2Q96I99 432 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 API5Q9BZZ5 524 aaKnown RBP7.4□□□□□ -1.22
ATXN3-230ENST00000554673 UBN2Q6ZU65 1347 aa7.4□□□□□ -1.22
ATXN3-230ENST00000554673 AK9Q5TCS8 1911 aa7.4□□□□□ -1.23
ATXN3-230ENST00000554673 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 NRXN2Q9P2S2 1712 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 IBTKQ9P2D0 1353 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 GMPRP36959 345 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 RFX5P48382 616 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 AIMP1Q12904 312 aaKnown RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 DIXDC1Q155Q3 683 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 C16orf71Q8IYS4 520 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 DNAAF4Q8WXU2 420 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 QTRT2Q9H974 415 aaKnown RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 DDX19BQ9UMR2 479 aa7.39□□□□□ -1.23
ATXN3-230ENST00000554673 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
ATXN3-230ENST00000554673 COL11A2P13942 1736 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 QSER1Q2KHR3 1735 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ARAP2Q8WZ64 1704 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 NEURL1BA8MQ27 555 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 SMARCA5O60264 1052 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ALDH1A1P00352 501 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 EIF5P55010 431 aaKnown RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 C8orf34Q49A92 452 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 SLC4A10Q6U841 1118 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ZSCAN1Q8NBB4 408 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ISCA1Q9BUE6 129 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 METTL22Q9BUU2 404 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 CDCA7Q9BWT1 371 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 DBF4Q9UBU7 674 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 NXF1Q9UBU9 619 aaKnown RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 ZNF646O15015 1829 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-230ENST00000554673 KIAA1551Q9HCM1 1747 aa7.38□□□□□ -1.23
ATXN3-230ENST00000554673 LOC102724428A0A0B4J2F2 783 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 CAMTA2O94983 1202 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 BMP1P13497 986 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 ABL2P42684 1182 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 CRKLP46109 303 aaKnown RBP7.37□□□□□ -1.23
ATXN3-230ENST00000554673 SIK1P57059 783 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 FOXO4P98177 505 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 Q3C1V9 767 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 CENPQQ7L2Z9 268 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-230ENST00000554673 FTSJ3Q8IY81 847 aaKnown RBP7.37□□□□□ -1.23
ATXN3-230ENST00000554673 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-230ENST00000554673 ADAMTS19Q8TE59 1207 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 DCTPP1Q9H773 170 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 TRPC5Q9UL62 973 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-230ENST00000554673 TBC1D2BQ9UPU7 963 aa7.37□□□□□ -1.23
ATXN3-230ENST00000554673 LTBP1Q14766 1721 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 ERBB4Q15303 1308 aa7.36□□□□□ -1.23
ATXN3-230ENST00000554673 IPO8O15397 1037 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms