RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 GRIK5Q16478 980 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 TWISTNBQ3B726 338 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-208ENST00000554534 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 REM2Q8IYK8 340 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-208ENST00000554534 WNK4Q96J92 1243 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 PTPN18Q99952 460 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 PRKRIP1Q9H875 184 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-208ENST00000554534 IQSEC3Q9UPP2 1182 aaPredicted RBP8.59□□□□□ -1.03
PCNX4-208ENST00000554534 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 SSC5DA1L4H1 1573 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 ZSWIM8A7E2V4 1837 aa8.59□□□□□ -1.03
PCNX4-208ENST00000554534 MKI67P46013 3256 aaKnown RBP8.58□□□□□ -1.04
PCNX4-208ENST00000554534 HTTP42858 3142 aa8.58□□□□□ -1.04
PCNX4-208ENST00000554534 FOXO4P98177 505 aa8.58□□□□□ -1.04
PCNX4-208ENST00000554534 SREBF2Q12772 1141 aa8.58□□□□□ -1.04
PCNX4-208ENST00000554534 CRHR2Q13324 411 aa8.58□□□□□ -1.04
PCNX4-208ENST00000554534 PKN2Q16513 984 aaKnown RBP8.58□□□□□ -1.04
PCNX4-208ENST00000554534 APOBEC3FQ8IUX4 373 aaKnown RBP8.58□□□□□ -1.04
PCNX4-208ENST00000554534 STK31Q9BXU1 1019 aa8.58□□□□□ -1.04
PCNX4-208ENST00000554534 TDRD3Q9H7E2 651 aaKnown RBP8.58□□□□□ -1.04
PCNX4-208ENST00000554534 ANKRD18BA2A2Z9 1011 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 TCP10L2B9ZVM9 353 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 CSF1RP07333 972 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 GYG1P46976 350 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 CACNB3P54284 484 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 FKBP5Q13451 457 aaPredicted RBP8.57□□□□□ -1.04
PCNX4-208ENST00000554534 RASA3Q14644 834 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 LMBR1LQ6UX01 489 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 PUS3Q9BZE2 481 aaKnown RBP8.57□□□□□ -1.04
PCNX4-208ENST00000554534 ANKRD2Q9GZV1 360 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 PCDH10Q9P2E7 1040 aa8.57□□□□□ -1.04
PCNX4-208ENST00000554534 KIAA0100Q14667 2235 aaKnown RBP8.57□□□□□ -1.04
PCNX4-208ENST00000554534 IRS2Q9Y4H2 1338 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 ZNF609O15014 1411 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 MANSC4A6NHS7 340 aaPredicted RBP8.56□□□□□ -1.04
PCNX4-208ENST00000554534 EXOSC9Q06265 439 aaKnown RBP8.56□□□□□ -1.04
PCNX4-208ENST00000554534 FLIIQ13045 1269 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 HABP4Q5JVS0 413 aaKnown RBP8.56□□□□□ -1.04
PCNX4-208ENST00000554534 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 ARHGAP39Q9C0H5 1083 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 TMEM39BQ9GZU3 492 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 PTPN22Q9Y2R2 807 aa8.56□□□□□ -1.04
PCNX4-208ENST00000554534 MYO3BQ8WXR4 1341 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 SPDYE2BA6NHP3 402 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 PPP1R12BO60237 982 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 SPDYE6P0CI01 402 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 CALD1Q05682 793 aaKnown RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 CHAF1AQ13111 956 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 SH3TC2Q8TF17 1288 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 OPTNQ96CV9 577 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 SPINK5Q9NQ38 1064 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 ZNF70Q9UC06 446 aaPredicted RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 TTF2Q9UNY4 1162 aaKnown RBP8.55□□□□□ -1.04
PCNX4-208ENST00000554534 A0A1B0GUL6 1792 aa8.55□□□□□ -1.04
PCNX4-208ENST00000554534 BRCA2P51587 3418 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 OTOFQ9HC10 1997 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 SP3Q02447 781 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 IFIT5Q13325 482 aaKnown RBP8.54□□□□□ -1.04
PCNX4-208ENST00000554534 SUPT20HL1Q3ZLR7 823 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 TAF7LQ5H9L4 462 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 SLC4A10Q6U841 1118 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 LDHAL6AQ6ZMR3 332 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.54□□□□□ -1.04
PCNX4-208ENST00000554534 FAM43AQ8N2R8 423 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 BRI3BPQ8WY22 251 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 OTUD5Q96G74 571 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 PTCH2Q9Y6C5 1203 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 CEP290O15078 2479 aa8.54□□□□□ -1.04
PCNX4-208ENST00000554534 CCL15-CCL14A0A0B4J2E2 113 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 MYO1BO43795 1136 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 VAMP4O75379 141 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 ALDH1A1P00352 501 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 IL1R1P14778 569 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 IREB2P48200 963 aaKnown RBP8.53□□□□□ -1.04
PCNX4-208ENST00000554534 CCL15Q16663 113 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 BEND3Q5T5X7 828 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 DZIP1LQ8IYY4 767 aaKnown RBP8.53□□□□□ -1.04
PCNX4-208ENST00000554534 LINS1Q8NG48 757 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 ZKSCAN4Q969J2 545 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-208ENST00000554534 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 FAM84BQ96KN1 310 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-208ENST00000554534 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
PCNX4-208ENST00000554534 FANCIQ9NVI1 1328 aa8.53□□□□□ -1.04
PCNX4-208ENST00000554534 SLURP2P0DP57 97 aa8.52□□□□□ -1.05
PCNX4-208ENST00000554534 ZBTB48P10074 688 aaPredicted RBP8.52□□□□□ -1.05
PCNX4-208ENST00000554534 INHBEP58166 350 aa8.52□□□□□ -1.05
PCNX4-208ENST00000554534 VGLL4Q14135 290 aa8.52□□□□□ -1.05
PCNX4-208ENST00000554534 TAF1CQ15572 869 aaPredicted RBP8.52□□□□□ -1.05
PCNX4-208ENST00000554534 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
PCNX4-208ENST00000554534 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms