RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TSPYL4Q9UJ04 414 aa21.97■■□□□ 1.11
NEK9-204ENST00000554258 MED23Q9ULK4 1368 aa21.97■■□□□ 1.11
NEK9-204ENST00000554258 NEFMP07197 916 aa21.96■■□□□ 1.11
NEK9-204ENST00000554258 GRK4P32298 578 aa21.96■■□□□ 1.11
NEK9-204ENST00000554258 FAM43AQ8N2R8 423 aa21.96■■□□□ 1.11
NEK9-204ENST00000554258 ISCA1Q9BUE6 129 aa21.96■■□□□ 1.11
NEK9-204ENST00000554258 ECM2O94769 699 aaPredicted RBP21.95■■□□□ 1.1
NEK9-204ENST00000554258 RALBP1Q15311 655 aa21.95■■□□□ 1.1
NEK9-204ENST00000554258 DLGAP5Q15398 846 aa21.95■■□□□ 1.1
NEK9-204ENST00000554258 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
NEK9-204ENST00000554258 RAET1EQ8TD07 263 aa21.95■■□□□ 1.1
NEK9-204ENST00000554258 BIN2Q9UBW5 565 aaPredicted RBP21.95■■□□□ 1.1
NEK9-204ENST00000554258 ALPK3Q96L96 1907 aa21.95■■□□□ 1.1
NEK9-204ENST00000554258 PRUNE2Q8WUY3 3088 aa21.94■■□□□ 1.1
NEK9-204ENST00000554258 TLR2O60603 784 aa21.94■■□□□ 1.1
NEK9-204ENST00000554258 BMP8BP34820 402 aa21.94■■□□□ 1.1
NEK9-204ENST00000554258 GTF2A2P52657 109 aa21.94■■□□□ 1.1
NEK9-204ENST00000554258 U2AF1L4Q8WU68 220 aaKnown RBP21.94■■□□□ 1.1
NEK9-204ENST00000554258 PRKRIP1Q9H875 184 aaPredicted RBP21.94■■□□□ 1.1
NEK9-204ENST00000554258 ZNF804BA4D1E1 1349 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 LRIT3Q3SXY7 679 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 CCDC152Q4G0S7 254 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 TTLL5Q6EMB2 1281 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 ANKRD18AQ8IVF6 992 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 PLBD2Q8NHP8 589 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 GDF15Q99988 308 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 SRRDQ9UH36 339 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 RIPOR2Q9Y4F9 1068 aa21.93■■□□□ 1.1
NEK9-204ENST00000554258 LAMA2P24043 3122 aaKnown RBP21.92■■□□□ 1.1
NEK9-204ENST00000554258 HSP90B1P14625 803 aaKnown RBP21.92■■□□□ 1.1
NEK9-204ENST00000554258 TRIM47Q96LD4 638 aa21.92■■□□□ 1.1
NEK9-204ENST00000554258 COA1Q9GZY4 146 aa21.92■■□□□ 1.1
NEK9-204ENST00000554258 BCAMP50895 628 aa21.91■■□□□ 1.1
NEK9-204ENST00000554258 UBXN2AP68543 259 aa21.91■■□□□ 1.1
NEK9-204ENST00000554258 CNKSR2Q8WXI2 1034 aa21.91■■□□□ 1.1
NEK9-204ENST00000554258 SPEF2Q9C093 1822 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 RPTORQ8N122 1335 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 CLRN2A0PK11 232 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 MYO1BO43795 1136 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 COL9A1P20849 921 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 HOXD10P28358 340 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 CCDC85AQ96PX6 553 aaPredicted RBP21.9■■□□□ 1.1
NEK9-204ENST00000554258 VEZTQ9HBM0 779 aa21.9■■□□□ 1.1
NEK9-204ENST00000554258 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
NEK9-204ENST00000554258 DIEXFQ68CQ4 756 aaKnown RBP21.89■■□□□ 1.09
NEK9-204ENST00000554258 SGPL1O95470 568 aa21.88■■□□□ 1.09
NEK9-204ENST00000554258 PSMC4P43686 418 aa21.88■■□□□ 1.09
NEK9-204ENST00000554258 MYPNQ86TC9 1320 aa21.87■■□□□ 1.09
NEK9-204ENST00000554258 OSBPP22059 807 aa21.87■■□□□ 1.09
NEK9-204ENST00000554258 GTF2IP78347 998 aa21.87■■□□□ 1.09
NEK9-204ENST00000554258 ZBTB38Q8NAP3 1195 aaPredicted RBP21.87■■□□□ 1.09
NEK9-204ENST00000554258 MTMR14Q8NCE2 650 aa21.87■■□□□ 1.09
NEK9-204ENST00000554258 HELBQ8NG08 1087 aaPredicted RBP21.87■■□□□ 1.09
NEK9-204ENST00000554258 UNC93B1Q9H1C4 597 aa21.87■■□□□ 1.09
NEK9-204ENST00000554258 MUC3AQ02505 3323 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 ANP32CO43423 234 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 FMNL1O95466 1100 aaPredicted RBP21.86■■□□□ 1.09
NEK9-204ENST00000554258 CTGFP29279 349 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 TRIM28Q13263 835 aaKnown RBP21.86■■□□□ 1.09
NEK9-204ENST00000554258 RASA3Q14644 834 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 NFE2L2Q16236 605 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 TDHQ8IZJ6 230 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 ZCCHC17Q9NP64 241 aaKnown RBP21.86■■□□□ 1.09
NEK9-204ENST00000554258 CHPF2Q9P2E5 772 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 PCDHAC2Q9Y5I4 1007 aa21.86■■□□□ 1.09
NEK9-204ENST00000554258 TFRCP02786 760 aaKnown RBP21.85■■□□□ 1.09
NEK9-204ENST00000554258 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
NEK9-204ENST00000554258 VGLL4Q14135 290 aa21.85■■□□□ 1.09
NEK9-204ENST00000554258 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.85■■□□□ 1.09
NEK9-204ENST00000554258 TXNRD3Q86VQ6 643 aa21.85■■□□□ 1.09
NEK9-204ENST00000554258 ZMYND8Q9ULU4 1186 aaPredicted RBP21.85■■□□□ 1.09
NEK9-204ENST00000554258 PDE8AO60658 829 aa21.84■■□□□ 1.09
NEK9-204ENST00000554258 CETPP11597 493 aa21.84■■□□□ 1.09
NEK9-204ENST00000554258 C7orf61Q8IZ16 206 aa21.84■■□□□ 1.09
NEK9-204ENST00000554258 CSADQ9Y600 493 aa21.84■■□□□ 1.09
NEK9-204ENST00000554258 MYBBP1AQ9BQG0 1328 aaKnown RBP21.83■■□□□ 1.09
NEK9-204ENST00000554258 SPDYE2BA6NHP3 402 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 BTBD19C9JJ37 291 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 SPDYE6P0CI01 402 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 CFAP100Q494V2 611 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 CDC5LQ99459 802 aaKnown RBP21.83■■□□□ 1.09
NEK9-204ENST00000554258 CPA4Q9UI42 421 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 MINPP1Q9UNW1 487 aa21.83■■□□□ 1.09
NEK9-204ENST00000554258 MAP3K9P80192 1104 aa21.82■■□□□ 1.08
NEK9-204ENST00000554258 C17orf99Q6UX52 265 aa21.82■■□□□ 1.08
NEK9-204ENST00000554258 SLAIN1Q8ND83 568 aa21.82■■□□□ 1.08
NEK9-204ENST00000554258 PRMT6Q96LA8 375 aaPredicted RBP21.82■■□□□ 1.08
NEK9-204ENST00000554258 IRS2Q9Y4H2 1338 aa21.81■■□□□ 1.08
NEK9-204ENST00000554258 F8W031 263 aaPredicted RBP21.81■■□□□ 1.08
NEK9-204ENST00000554258 CAPN2P17655 700 aa21.81■■□□□ 1.08
NEK9-204ENST00000554258 PAWRQ96IZ0 340 aaKnown RBP21.81■■□□□ 1.08
NEK9-204ENST00000554258 GUCD1Q96NT3 240 aa21.81■■□□□ 1.08
NEK9-204ENST00000554258 MGAMO43451 1857 aa21.81■■□□□ 1.08
NEK9-204ENST00000554258 MAGEA10P43363 369 aaPredicted RBP21.8■■□□□ 1.08
NEK9-204ENST00000554258 DEFB118Q96PH6 123 aa21.8■■□□□ 1.08
NEK9-204ENST00000554258 UBE2OQ9C0C9 1292 aaKnown RBP21.8■■□□□ 1.08
NEK9-204ENST00000554258 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
NEK9-204ENST00000554258 AOX1Q06278 1338 aa21.8■■□□□ 1.08
NEK9-204ENST00000554258 PRKCZQ05513 592 aa21.79■■□□□ 1.08
NEK9-204ENST00000554258 TNFAIP1Q13829 316 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms