RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 EFR3BQ9Y2G0 817 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 GREM1O60565 184 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 ITGA6P23229 1130 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 GRIA4P48058 902 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 MAP3K10Q02779 954 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 CAMK2GQ13555 558 aaPredicted RBP6.84□□□□□ -1.31
PABPN1-204ENST00000554062 CWF19L2Q2TBE0 894 aaKnown RBP6.84□□□□□ -1.31
PABPN1-204ENST00000554062 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 LRP10Q7Z4F1 713 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 MICALL1Q8N3F8 863 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 ASAP3Q8TDY4 903 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 MIR1-1HGQ9H1L0 117 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 TMX1Q9H3N1 280 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 STRN4Q9NRL3 753 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 CYP8B1Q9UNU6 501 aa6.84□□□□□ -1.31
PABPN1-204ENST00000554062 NISCHQ9Y2I1 1504 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 ENC1O14682 589 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 FBXO24O75426 580 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 BPNT1O95861 308 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 THBS1P07996 1170 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 EIF2AK2P19525 551 aaKnown RBP6.83□□□□□ -1.32
PABPN1-204ENST00000554062 MAP3K11Q16584 847 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 DBN1Q16643 649 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 ZNF468Q5VIY5 522 aaPredicted RBP6.83□□□□□ -1.32
PABPN1-204ENST00000554062 FAM196AQ6ZSG2 479 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 GOLM1Q8NBJ4 401 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 NKD1Q969G9 470 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 SLC30A3Q99726 388 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 UBE2OQ9C0C9 1292 aaKnown RBP6.83□□□□□ -1.32
PABPN1-204ENST00000554062 SEC31BQ9NQW1 1179 aa6.83□□□□□ -1.32
PABPN1-204ENST00000554062 NSFL1CQ9UNZ2 370 aaKnown RBP6.83□□□□□ -1.32
PABPN1-204ENST00000554062 NFKBIEO00221 500 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 GFRA3O60609 400 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 B3GALT4O96024 378 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 PF4P02776 101 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 CELA3AP09093 270 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 CABP4P57796 275 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 MPP2Q14168 576 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 GRIN2CQ14957 1233 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 COL13A1Q5TAT6 717 aaPredicted RBP6.82□□□□□ -1.32
PABPN1-204ENST00000554062 PCNX4Q63HM2 1172 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 SLITRK4Q8IW52 837 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
PABPN1-204ENST00000554062 EAF1Q96JC9 268 aaPredicted RBP6.82□□□□□ -1.32
PABPN1-204ENST00000554062 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 SRRTQ9BXP5 876 aaKnown RBP6.82□□□□□ -1.32
PABPN1-204ENST00000554062 GINM1Q9NU53 330 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 PRKAG3Q9UGI9 489 aa6.82□□□□□ -1.32
PABPN1-204ENST00000554062 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 K7ELQ4 463 aaPredicted RBP6.81□□□□□ -1.32
PABPN1-204ENST00000554062 NME2P22392 152 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 ZNF165P49910 485 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 SDE2Q6IQ49 451 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 ZNF746Q6NUN9 644 aaPredicted RBP6.81□□□□□ -1.32
PABPN1-204ENST00000554062 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 TNFRSF25Q93038 417 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 TRIM47Q96LD4 638 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 TRIM56Q9BRZ2 755 aaKnown RBP6.81□□□□□ -1.32
PABPN1-204ENST00000554062 RASSF4Q9H2L5 321 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 ZNF408Q9H9D4 720 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 AAASQ9NRG9 546 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 DNAJB12Q9NXW2 375 aaKnown RBP6.81□□□□□ -1.32
PABPN1-204ENST00000554062 FRRS1LQ9P0K9 344 aa6.81□□□□□ -1.32
PABPN1-204ENST00000554062 BMP4P12644 408 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 GARTP22102 1010 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 ADH6P28332 368 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 FAM160A1Q05DH4 1040 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 PCDH1Q08174 1060 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 AP3B2Q13367 1082 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 SERINC3Q13530 473 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 BMS1Q14692 1282 aaKnown RBP6.8□□□□□ -1.32
PABPN1-204ENST00000554062 SPRED3Q2MJR0 410 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 SYT9Q86SS6 491 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 REXO1Q8N1G1 1221 aaKnown RBP6.8□□□□□ -1.32
PABPN1-204ENST00000554062 GATAD2BQ8WXI9 593 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 TBX22Q9Y458 520 aa6.8□□□□□ -1.32
PABPN1-204ENST00000554062 TFE3P19532 575 aaPredicted RBP6.79□□□□□ -1.32
PABPN1-204ENST00000554062 RAB33AQ14088 237 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 TAF7LQ5H9L4 462 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 CEP135Q66GS9 1140 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 LLGL2Q6P1M3 1020 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 ANKS3Q6ZW76 656 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 RAB44Q7Z6P3 723 aaPredicted RBP6.79□□□□□ -1.32
PABPN1-204ENST00000554062 FAM35AQ86V20 835 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 PLD4Q96BZ4 506 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 FERD3LQ96RJ6 166 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 ADAM19Q9H013 955 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 MUC3BQ9H195 1237 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 UBP1Q9NZI7 540 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 TLR6Q9Y2C9 796 aa6.79□□□□□ -1.32
PABPN1-204ENST00000554062 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
PABPN1-204ENST00000554062 METTL12A8MUP2 240 aa6.78□□□□□ -1.32
PABPN1-204ENST00000554062 PPM1GO15355 546 aaPredicted RBP6.78□□□□□ -1.32
PABPN1-204ENST00000554062 ARAFP10398 606 aa6.78□□□□□ -1.32
PABPN1-204ENST00000554062 ACPPP15309 386 aa6.78□□□□□ -1.32
PABPN1-204ENST00000554062 MAP2K3P46734 347 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms