RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 MCAMP43121 646 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-209ENST00000553949 STRIP1Q5VSL9 837 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 TSHZ3Q63HK5 1081 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 CIAPIN1Q6FI81 312 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 USP17L1Q7RTZ2 530 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 HMG20BQ9P0W2 317 aa14.96□□□□□ -0.01
SHMT2-209ENST00000553949 COL1A1P02452 1464 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-209ENST00000553949 TTC41PQ6P2S7 1318 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 FAM205AQ6ZU69 1335 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 PSMD14O00487 310 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 PDE1AP54750 535 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 TNIP1Q15025 636 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 DACT2Q5SW24 774 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 PI16Q6UXB8 463 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 SPATA5Q8NB90 893 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHMT2-209ENST00000553949 STAP2Q9UGK3 403 aa14.95□□□□□ -0.02
SHMT2-209ENST00000553949 PDS5AQ29RF7 1337 aaKnown RBP14.94□□□□□ -0.02
SHMT2-209ENST00000553949 VIL1P09327 827 aaKnown RBP14.94□□□□□ -0.02
SHMT2-209ENST00000553949 PLEKHM2Q8IWE5 1019 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 WDR66Q8TBY9 1149 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 MXD3Q9BW11 206 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 BOLA2Q9H3K6 86 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 GJA3Q9Y6H8 435 aa14.94□□□□□ -0.02
SHMT2-209ENST00000553949 ERC2O15083 957 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 GLRX3O76003 335 aaKnown RBP14.93□□□□□ -0.02
SHMT2-209ENST00000553949 FKBP1AP62942 108 aaKnown RBP14.93□□□□□ -0.02
SHMT2-209ENST00000553949 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 RSBN1LQ6PCB5 846 aaPredicted RBP14.93□□□□□ -0.02
SHMT2-209ENST00000553949 GPC2Q8N158 579 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 PI4K2BQ8TCG2 481 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 TBC1D22AQ8WUA7 517 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 HAUS7Q99871 368 aa14.93□□□□□ -0.02
SHMT2-209ENST00000553949 TIAM2Q8IVF5 1701 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 DICER1Q9UPY3 1922 aaKnown RBP14.92□□□□□ -0.02
SHMT2-209ENST00000553949 ZAP70P43403 619 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 DPY19L2Q6NUT2 758 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 SKAP1Q86WV1 359 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 CERS5Q8N5B7 392 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 DNAJC2Q99543 621 aaKnown RBP14.92□□□□□ -0.02
SHMT2-209ENST00000553949 OSBPL3Q9H4L5 887 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 ZBTB12Q9Y330 459 aaPredicted RBP14.92□□□□□ -0.02
SHMT2-209ENST00000553949 NDUFB9Q9Y6M9 179 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 CCDC88AQ3V6T2 1871 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 AOX1Q06278 1338 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 SALL1Q9NSC2 1324 aa14.92□□□□□ -0.02
SHMT2-209ENST00000553949 SCN9AQ15858 1988 aa14.91□□□□□ -0.02
SHMT2-209ENST00000553949 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
SHMT2-209ENST00000553949 DDNO94850 711 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-209ENST00000553949 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-209ENST00000553949 GMPSP49915 693 aaPredicted RBP14.91□□□□□ -0.02
SHMT2-209ENST00000553949 TBC1D9Q6ZT07 1266 aa14.91□□□□□ -0.02
SHMT2-209ENST00000553949 AGBL3Q8NEM8 1001 aa14.91□□□□□ -0.02
SHMT2-209ENST00000553949 GMLQ99445 158 aa14.91□□□□□ -0.02
SHMT2-209ENST00000553949 RPS12P25398 132 aaKnown RBP14.9□□□□□ -0.02
SHMT2-209ENST00000553949 ZGPATQ8N5A5 531 aaKnown RBP14.9□□□□□ -0.02
SHMT2-209ENST00000553949 ANTXR1Q9H6X2 564 aa14.9□□□□□ -0.02
SHMT2-209ENST00000553949 PAG1Q9NWQ8 432 aa14.9□□□□□ -0.02
SHMT2-209ENST00000553949 SUGT1Q9Y2Z0 365 aa14.9□□□□□ -0.02
SHMT2-209ENST00000553949 CHD4Q14839 1912 aa14.9□□□□□ -0.02
SHMT2-209ENST00000553949 GOLIM4O00461 696 aa14.89□□□□□ -0.03
SHMT2-209ENST00000553949 GRIK5Q16478 980 aa14.89□□□□□ -0.03
SHMT2-209ENST00000553949 KIAA0825Q8IV33 1275 aa14.89□□□□□ -0.03
SHMT2-209ENST00000553949 DPF2Q92785 391 aa14.89□□□□□ -0.03
SHMT2-209ENST00000553949 EDC3Q96F86 508 aaKnown RBP14.89□□□□□ -0.03
SHMT2-209ENST00000553949 PIH1D3Q9NQM4 214 aaKnown RBP14.89□□□□□ -0.03
SHMT2-209ENST00000553949 ABCF2Q9UG63 623 aa14.89□□□□□ -0.03
SHMT2-209ENST00000553949 F8W031 263 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 MAP4K4O95819 1239 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 LDHBP07195 334 aaKnown RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 USP17L8P0C7I0 530 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 PRDX5P30044 214 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 RGS3P49796 1198 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 SCNN1DP51172 638 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 TTF1Q15361 905 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 SPTY2D1Q68D10 685 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 L3MBTL3Q96JM7 780 aaPredicted RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 LRP2BPQ9P2M1 347 aa14.88□□□□□ -0.03
SHMT2-209ENST00000553949 TTF2Q9UNY4 1162 aaKnown RBP14.88□□□□□ -0.03
SHMT2-209ENST00000553949 GPRC5DQ9NZD1 345 aa14.87□□□□□ -0.03
SHMT2-209ENST00000553949 RAI14Q9P0K7 980 aa14.87□□□□□ -0.03
SHMT2-209ENST00000553949 SHTN1A0MZ66 631 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 LMOD1P29536 600 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 ZNF280AP59817 542 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 TTC22Q5TAA0 569 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 DZIP1Q86YF9 867 aaKnown RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 MICALL2Q8IY33 904 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 OGFOD1Q8N543 542 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 CNOT7Q9UIV1 285 aaKnown RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 HDAC9Q9UKV0 1011 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 ZNF646O15015 1829 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-209ENST00000553949 PSME4Q14997 1843 aa14.86□□□□□ -0.03
SHMT2-209ENST00000553949 AKAP11Q9UKA4 1901 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms