RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 PRAMEF18Q5VWM3 479 aa11.42□□□□□ -0.58
SDR39U1-207ENST00000553937 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
SDR39U1-207ENST00000553937 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
SDR39U1-207ENST00000553937 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
SDR39U1-207ENST00000553937 ZBED9Q6R2W3 1325 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 COL1A1P02452 1464 aaPredicted RBP11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 MMP14P50281 582 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 FKBP1BP68106 108 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 KIF23Q02241 960 aaPredicted RBP11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 MOB2Q70IA6 237 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 RASAL3Q86YV0 1011 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 ZBED3Q96IU2 234 aaPredicted RBP11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 JAG2Q9Y219 1238 aa11.41□□□□□ -0.58
SDR39U1-207ENST00000553937 F8W031 263 aaPredicted RBP11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 GYG1P46976 350 aa11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 ALDH1L2Q3SY69 923 aa11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 APOBEC3FQ8IUX4 373 aaKnown RBP11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 SMC4Q9NTJ3 1288 aa11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 PCDHAC2Q9Y5I4 1007 aa11.4□□□□□ -0.58
SDR39U1-207ENST00000553937 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 SSC5DA1L4H1 1573 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 FKBP1AP62942 108 aaKnown RBP11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 UBE4AQ14139 1066 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 TTLL12Q14166 644 aaPredicted RBP11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 DLGAP5Q15398 846 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 ABHD8Q96I13 439 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 USP44Q9H0E7 712 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
SDR39U1-207ENST00000553937 FAM205AQ6ZU69 1335 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 NF2P35240 595 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 CFAP100Q494V2 611 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 LRRC24Q50LG9 513 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 MTMR14Q8NCE2 650 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 TDRD7Q8NHU6 1098 aaKnown RBP11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 KLHDC4Q8TBB5 520 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 FAM84BQ96KN1 310 aaPredicted RBP11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 SAGE1Q9NXZ1 904 aa11.38□□□□□ -0.59
SDR39U1-207ENST00000553937 AOX1Q06278 1338 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 CLRN2A0PK11 232 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 HIBADHP31937 336 aaKnown RBP11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 PRKG1Q13976 671 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 METTL24Q5JXM2 366 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 MFSD14BQ5SR56 506 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 RNF186Q9NXI6 227 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
SDR39U1-207ENST00000553937 MYO1BO43795 1136 aa11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 TRPA1O75762 1119 aa11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 BCAR3O75815 825 aa11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 CT47B1P0C2W7 299 aaPredicted RBP11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 RBM5P52756 815 aaKnown RBP eCLIP11.36□□□□□ -0.592e-17■■■■■ 60.9
SDR39U1-207ENST00000553937 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 FZD1Q9UP38 647 aa11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 IQSEC3Q9UPP2 1182 aaPredicted RBP11.36□□□□□ -0.59
SDR39U1-207ENST00000553937 PDE8BO95263 885 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 RARSP54136 660 aaKnown RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 PTPN12Q05209 780 aaKnown RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 ARMC9Q7Z3E5 817 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 VPS37DQ86XT2 251 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 VEZTQ9HBM0 779 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 TTF2Q9UNY4 1162 aaKnown RBP11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 MYH2Q9UKX2 1941 aa11.35□□□□□ -0.59
SDR39U1-207ENST00000553937 UBTFL1P0CB47 393 aaPredicted RBP11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 MKRN3Q13064 507 aaKnown RBP11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 CHAF1AQ13111 956 aaPredicted RBP11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 DGKZQ13574 1117 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 GRIK5Q16478 980 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 CAVIN4Q5BKX8 364 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 FBXO33Q7Z6M2 555 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 SERPINA10Q9UK55 444 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 TNNQ9UQP3 1299 aa11.34□□□□□ -0.59
SDR39U1-207ENST00000553937 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 EYA2O00167 538 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 FRAT2O75474 233 aaPredicted RBP11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 BCAMP50895 628 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 LDLRAD1Q5T700 205 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 API5Q9BZZ5 524 aaKnown RBP11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 TDRD3Q9H7E2 651 aaKnown RBP11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 KIF16BQ96L93 1317 aa11.33□□□□□ -0.6
SDR39U1-207ENST00000553937 PPP1R12BO60237 982 aaPredicted RBP11.32□□□□□ -0.6
SDR39U1-207ENST00000553937 FGFR2P21802 821 aa11.32□□□□□ -0.6
SDR39U1-207ENST00000553937 CRKP46108 304 aa11.32□□□□□ -0.6
SDR39U1-207ENST00000553937 RASA3Q14644 834 aa11.32□□□□□ -0.6
SDR39U1-207ENST00000553937 MAP3K11Q16584 847 aa11.32□□□□□ -0.6
SDR39U1-207ENST00000553937 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms