RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 LAMB2P55268 1798 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 DDNO94850 711 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-209ENST00000553855 NBPF7P0C2Y1 421 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-209ENST00000553855 PRELPP51888 382 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 FOXO4P98177 505 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 TNIP1Q15025 636 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 LDHAL6AQ6ZMR3 332 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
PSEN1-209ENST00000553855 TBC1D16Q8TBP0 767 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 SUCLG2Q96I99 432 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
PSEN1-209ENST00000553855 NMRK2Q9NPI5 230 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 PODXL2Q9NZ53 605 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 ZNRF3Q9ULT6 936 aa10.42□□□□□ -0.74
PSEN1-209ENST00000553855 UTYO14607 1347 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 FER1L6Q2WGJ9 1857 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 FZD9O00144 591 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 TOMM70O94826 608 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 CIAPIN1Q6FI81 312 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 GPC2Q8N158 579 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 MINPP1Q9UNW1 487 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 LEMD3Q9Y2U8 911 aa10.41□□□□□ -0.74
PSEN1-209ENST00000553855 GOLGB1Q14789 3259 aaKnown RBP10.41□□□□□ -0.74
PSEN1-209ENST00000553855 ST18O60284 1047 aa10.4□□□□□ -0.74
PSEN1-209ENST00000553855 TRIM27P14373 513 aa10.4□□□□□ -0.74
PSEN1-209ENST00000553855 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
PSEN1-209ENST00000553855 DZIP1LQ8IYY4 767 aaKnown RBP10.4□□□□□ -0.74
PSEN1-209ENST00000553855 USP44Q9H0E7 712 aa10.4□□□□□ -0.74
PSEN1-209ENST00000553855 BICC1Q9H694 974 aaKnown RBP10.4□□□□□ -0.74
PSEN1-209ENST00000553855 POLLQ9UGP5 575 aa10.4□□□□□ -0.74
PSEN1-209ENST00000553855 HACL1Q9UJ83 578 aa10.4□□□□□ -0.74
PSEN1-209ENST00000553855 ZNF541Q9H0D2 1346 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 PLIN1O60240 522 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 ECE2O60344 883 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 SLC34A2O95436 690 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 CHRNDQ07001 517 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 EPHA10Q5JZY3 1008 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 ITPRIPQ8IWB1 547 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 CHMP4BQ9H444 224 aaKnown RBP10.39□□□□□ -0.75
PSEN1-209ENST00000553855 DBNDD1Q9H9R9 158 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 SNED1Q8TER0 1413 aa10.39□□□□□ -0.75
PSEN1-209ENST00000553855 TIAM2Q8IVF5 1701 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 SBF1O95248 1867 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 ZNF804BA4D1E1 1349 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 MROH5Q6ZUA9 1318 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 RAD17O75943 681 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 GNAI2P04899 355 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-209ENST00000553855 RABL6Q3YEC7 729 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-209ENST00000553855 PNMA8AQ86V59 439 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-209ENST00000553855 SMC1BQ8NDV3 1235 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
PSEN1-209ENST00000553855 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
PSEN1-209ENST00000553855 EPAS1Q99814 870 aa10.38□□□□□ -0.75
PSEN1-209ENST00000553855 CXCL9Q07325 125 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 FSTL1Q12841 308 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 EAPPQ56P03 285 aaPredicted RBP10.37□□□□□ -0.75
PSEN1-209ENST00000553855 METTL24Q5JXM2 366 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 ZNF804AQ7Z570 1209 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 PODNQ7Z5L7 613 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 SLC51AQ86UW1 340 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 FBXW7Q969H0 707 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 COA1Q9GZY4 146 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
PSEN1-209ENST00000553855 MED23Q9ULK4 1368 aa10.37□□□□□ -0.75
PSEN1-209ENST00000553855 H7C1D1 291 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 TAF5LO75529 589 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 EPHX2P34913 555 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 VPS37DQ86XT2 251 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 TMEM57Q8N5G2 664 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 ANKRD44Q8N8A2 993 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 HELBQ8NG08 1087 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-209ENST00000553855 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
PSEN1-209ENST00000553855 MEIS3Q99687 375 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 CDHR5Q9HBB8 845 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 MYH3P11055 1940 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 LRRC37AA6NMS7 1700 aa10.36□□□□□ -0.75
PSEN1-209ENST00000553855 DICER1Q9UPY3 1922 aaKnown RBP10.35□□□□□ -0.75
PSEN1-209ENST00000553855 USP17L3A6NCW0 530 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 USP17L4A6NCW7 530 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 RPS12P25398 132 aaKnown RBP10.35□□□□□ -0.75
PSEN1-209ENST00000553855 UBE4AQ14139 1066 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 CAVIN4Q5BKX8 364 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 KAZALD1Q96I82 304 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 TAF1DQ9H5J8 278 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-209ENST00000553855 NPDC1Q9NQX5 325 aaPredicted RBP10.35□□□□□ -0.75
PSEN1-209ENST00000553855 CCDC88AQ3V6T2 1871 aa10.35□□□□□ -0.75
PSEN1-209ENST00000553855 EYA2O00167 538 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 PSMD14O00487 310 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 SRGAP3O43295 1099 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 MAP3K7O43318 606 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 FRAT2O75474 233 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-209ENST00000553855 IFIT1P09914 478 aaKnown RBP10.34□□□□□ -0.75
PSEN1-209ENST00000553855 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
PSEN1-209ENST00000553855 USP50Q70EL3 339 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms