RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 RIPOR2Q9Y4F9 1068 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 TTC36A6NLP5 189 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 WNT7AO00755 349 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 PPP1R12AO14974 1030 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 FYB1O15117 783 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MAP4K4O95819 1239 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 SATB1Q01826 763 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 PSMD2Q13200 908 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 SLC4A8Q2Y0W8 1093 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 APBB1IPQ7Z5R6 666 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.85□□□□□ -1.63
RDH11-204ENST00000553578 NME8Q8N427 588 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 RNF217Q8TC41 542 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MORC4Q8TE76 937 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 KIAA1522Q9P206 1035 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 NOVA2Q9UNW9 492 aaKnown RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 ARHGEF10O15013 1369 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 PPM1FP49593 454 aaPredicted RBP4.84□□□□□ -1.63
RDH11-204ENST00000553578 ARID5BQ14865 1188 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 C21orf62-AS1Q17RA5 79 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 VPS37AQ8NEZ2 397 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 JDP2Q8WYK2 163 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 TSPYL1Q9H0U9 437 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 UPF2Q9HAU5 1272 aaKnown RBP4.84□□□□□ -1.63
RDH11-204ENST00000553578 KDM2BQ8NHM5 1336 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 SH3BP2P78314 561 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 PTK2Q05397 1052 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 PKDCCQ504Y2 493 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 TMTC2Q8N394 836 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 SGSM3Q96HU1 749 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 ARHGAP9Q9BRR9 750 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 TMX1Q9H3N1 280 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 TOMM22Q9NS69 142 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 AMOTL2Q9Y2J4 779 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 CEP83Q9Y592 693 aa4.84□□□□□ -1.63
RDH11-204ENST00000553578 SOS1Q07889 1333 aaPredicted RBP4.84□□□□□ -1.64
RDH11-204ENST00000553578 PRR36Q9H6K5 1346 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 DYTNA2CJ06 578 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 POLD1P28340 1107 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 LTKP29376 864 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 VPS37DQ86XT2 251 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 BACH2Q9BYV9 841 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 TERF2IPQ9NYB0 399 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 KIF3AQ9Y496 699 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 PCDHB9Q9Y5E1 797 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 WASF2Q9Y6W5 498 aa4.84□□□□□ -1.64
RDH11-204ENST00000553578 NPHP4O75161 1426 aaPredicted RBP4.84□□□□□ -1.64
RDH11-204ENST00000553578 FAM187AA6NFU0 413 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 DYNC1I1O14576 645 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 VARSP26640 1264 aaKnown RBP4.83□□□□□ -1.64
RDH11-204ENST00000553578 CASC1Q6TDU7 716 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 CACTIN-AS1Q8N1I8 211 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 SCN11AQ9UI33 1791 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 ZNF853P0CG23 659 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 MRE11P49959 708 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 SLC20A2Q08357 652 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 TMEM164Q5U3C3 297 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 Q6ZNB5 142 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 TBC1D9Q6ZT07 1266 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 NAP1L4Q99733 375 aaKnown RBP4.83□□□□□ -1.64
RDH11-204ENST00000553578 NDUFB9Q9Y6M9 179 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 LRP6O75581 1613 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 OFD1O75665 1012 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 ATP2B2Q01814 1243 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 BECN1Q14457 450 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 THEMISQ8N1K5 641 aaPredicted RBP4.83□□□□□ -1.64
RDH11-204ENST00000553578 MRGPRX2Q96LB1 330 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 ADAMTS8Q9UP79 889 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 RREB1Q92766 1687 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 LAMB4A4D0S4 1761 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 ERBB4Q15303 1308 aa4.83□□□□□ -1.64
RDH11-204ENST00000553578 PXDNQ92626 1479 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 NRG2O14511 850 aaPredicted RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 ALDH1A1P00352 501 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 STK11IPQ8N1F8 1099 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PDILTQ8N807 584 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 FAM200AQ8TCP9 573 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 EMID1Q96A84 441 aaPredicted RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 SRPK1Q96SB4 655 aaKnown RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 HMX1Q9NP08 348 aaPredicted RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 SMC4Q9NTJ3 1288 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 USP19O94966 1318 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 TRIM37O94972 964 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 SKOR1P84550 965 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PDXDC2PQ6P474 469 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 SNIP1Q8TAD8 396 aaKnown RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 SLC10A4Q96EP9 437 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRAM1Q96QH2 718 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 CDK19Q9BWU1 502 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 BABAM1Q9NWV8 329 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PXDNLA1KZ92 1463 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 CCDC172P0C7W6 258 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 CALRP27797 417 aaKnown RBP4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRR20EP86478 221 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRR20CP86479 221 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRR20DP86480 221 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRR20BP86481 221 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 PRR20AP86496 221 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 FOXJ1Q92949 421 aa4.82□□□□□ -1.64
RDH11-204ENST00000553578 RUNDC1Q96C34 613 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms