RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
ABCD4-218ENST00000553486 FSTL1Q12841 308 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 BRD1O95696 1058 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 CPA1P15085 419 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 MCTP1Q6DN14 999 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 BLOC1S2Q6QNY1 142 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 CLEC4GQ6UXB4 293 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 UTP14AQ9BVJ6 771 aaKnown RBP18.28■□□□□ 0.52
ABCD4-218ENST00000553486 ANKRD31Q8N7Z5 1873 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 ABCC12Q96J65 1359 aa18.28■□□□□ 0.52
ABCD4-218ENST00000553486 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
ABCD4-218ENST00000553486 ST5P78524 1137 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 ZMYM1Q5SVZ6 1142 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.52
ABCD4-218ENST00000553486 SUSD4Q5VX71 490 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 DNAJC5GQ8N7S2 189 aa18.27■□□□□ 0.52
ABCD4-218ENST00000553486 GZF1Q9H116 711 aaPredicted RBP18.27■□□□□ 0.52
ABCD4-218ENST00000553486 ALDH8A1Q9H2A2 487 aaPredicted RBP18.27■□□□□ 0.52
ABCD4-218ENST00000553486 TNRC6CQ9HCJ0 1690 aaKnown RBP18.27■□□□□ 0.51
ABCD4-218ENST00000553486 GLTPD2A6NH11 291 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 C21orf2O43822 256 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 ADORA1P30542 326 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 SEC62Q99442 399 aaKnown RBP18.26■□□□□ 0.51
ABCD4-218ENST00000553486 ZNF652Q9Y2D9 606 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 BCORQ6W2J9 1755 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
ABCD4-218ENST00000553486 COL11A2P13942 1736 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-218ENST00000553486 ZFYP08048 801 aaPredicted RBP18.25■□□□□ 0.51
ABCD4-218ENST00000553486 SRGNP10124 158 aa18.25■□□□□ 0.51
ABCD4-218ENST00000553486 RPS6KB1P23443 525 aa18.25■□□□□ 0.51
ABCD4-218ENST00000553486 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
ABCD4-218ENST00000553486 DSCC1Q9BVC3 393 aa18.25■□□□□ 0.51
ABCD4-218ENST00000553486 WDR33Q9C0J8 1336 aaKnown RBP18.25■□□□□ 0.51
ABCD4-218ENST00000553486 RGL2O15211 777 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 STYK1Q6J9G0 422 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 NBPF5PQ86XG9 351 aaPredicted RBP18.24■□□□□ 0.51
ABCD4-218ENST00000553486 CNKSR1Q969H4 720 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 ZNF219Q9P2Y4 722 aaPredicted RBP18.24■□□□□ 0.51
ABCD4-218ENST00000553486 SMC3Q9UQE7 1217 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 MYH7P12883 1935 aa18.24■□□□□ 0.51
ABCD4-218ENST00000553486 PDE8BO95263 885 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
ABCD4-218ENST00000553486 ZNF512BQ96KM6 892 aaPredicted RBP18.23■□□□□ 0.51
ABCD4-218ENST00000553486 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
ABCD4-218ENST00000553486 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
ABCD4-218ENST00000553486 CHGBP05060 677 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 KLHL40Q2TBA0 621 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 VGLL2Q8N8G2 317 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 SMC1BQ8NDV3 1235 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 MASTLQ96GX5 879 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 DDX49Q9Y6V7 483 aaKnown RBP18.23■□□□□ 0.51
ABCD4-218ENST00000553486 LAMB2P55268 1798 aa18.23■□□□□ 0.51
ABCD4-218ENST00000553486 DDX60Q8IY21 1712 aaKnown RBP18.22■□□□□ 0.51
ABCD4-218ENST00000553486 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
ABCD4-218ENST00000553486 HCLS1P14317 486 aaPredicted RBP18.22■□□□□ 0.51
ABCD4-218ENST00000553486 NEK1Q96PY6 1258 aa18.22■□□□□ 0.51
ABCD4-218ENST00000553486 LMBRD1Q9NUN5 540 aa18.22■□□□□ 0.51
ABCD4-218ENST00000553486 LTBP3Q9NS15 1303 aa18.22■□□□□ 0.51
ABCD4-218ENST00000553486 FAM177BA6PVY3 158 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 ERFEQ4G0M1 354 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 CCDC152Q4G0S7 254 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 CCDC83Q8IWF9 413 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 TAOK3Q9H2K8 898 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
ABCD4-218ENST00000553486 TIAM2Q8IVF5 1701 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 AKAP11Q9UKA4 1901 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 WDR90Q96KV7 1748 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 LARGE1O95461 756 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 NTSR2O95665 410 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 HTRA3P83110 453 aa18.21■□□□□ 0.51
ABCD4-218ENST00000553486 FOXD4L5Q5VV16 416 aaPredicted RBP18.21■□□□□ 0.51
ABCD4-218ENST00000553486 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
ABCD4-218ENST00000553486 CYP21A2P08686 494 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 ZAP70P43403 619 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
ABCD4-218ENST00000553486 ME3Q16798 604 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 SOGA3Q5TF21 947 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 DPY19L2Q6NUT2 758 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 TPTE2Q6XPS3 522 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 LPIN2Q92539 896 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 MPHOSPH8Q99549 860 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 MAST3O60307 1309 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
ABCD4-218ENST00000553486 FSD2A1L4K1 749 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 KLRG2A4D1S0 409 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 UQCRFS1P1P0C7P4 283 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 PDIA4P13667 645 aaKnown RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.19■□□□□ 0.59e-7■■■□□ 18.5
ABCD4-218ENST00000553486 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 TAF6LQ9Y6J9 622 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 ARAP2Q8WZ64 1704 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 FER1L6Q2WGJ9 1857 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms