RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PTPRAP18433 802 aa8.28□□□□□ -1.08
SYNE2-210ENST00000553455 GRIK5Q16478 980 aa8.28□□□□□ -1.08
SYNE2-210ENST00000553455 LCE2CQ5TA81 110 aa8.28□□□□□ -1.08
SYNE2-210ENST00000553455 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
SYNE2-210ENST00000553455 TTC9Q92623 222 aa8.28□□□□□ -1.08
SYNE2-210ENST00000553455 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
SYNE2-210ENST00000553455 F6X3S4 739 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 ADAMTS2O95450 1211 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 C20orf204Q6ZNR8 217 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 IRF7Q92985 503 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 CEP44Q9C0F1 390 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 LACRTQ9GZZ8 138 aa8.27□□□□□ -1.09
SYNE2-210ENST00000553455 PAGE1O75459 146 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 ALBP02768 609 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 PCDH1Q08174 1060 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 ZNF423Q2M1K9 1284 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 NUDT8Q8WV74 236 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 SREK1Q8WXA9 508 aaKnown RBP8.26□□□□□ -1.09
SYNE2-210ENST00000553455 RHOVQ96L33 236 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 CAPN10Q9HC96 672 aa8.26□□□□□ -1.09
SYNE2-210ENST00000553455 SH2B1Q9NRF2 756 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-210ENST00000553455 B3GALT4O96024 378 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 EPHA1P21709 976 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 LIG3P49916 1009 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 MAP3K11Q16584 847 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 PHC3Q8NDX5 983 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 ADAMTS1Q9UHI8 967 aa8.25□□□□□ -1.09
SYNE2-210ENST00000553455 GPN3Q9UHW5 284 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-210ENST00000553455 RGS9O75916 674 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-210ENST00000553455 SLURP2P0DP57 97 aa8.24□□□□□ -1.09
SYNE2-210ENST00000553455 ESRRAP11474 423 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-210ENST00000553455 ALAS2P22557 587 aa8.24□□□□□ -1.09
SYNE2-210ENST00000553455 ZNF157P51786 506 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-210ENST00000553455 PWP1Q13610 501 aa8.24□□□□□ -1.09
SYNE2-210ENST00000553455 GDF6Q6KF10 455 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-210ENST00000553455 SLC43A3Q8NBI5 491 aa8.24□□□□□ -1.09
SYNE2-210ENST00000553455 USP35Q9P2H5 1018 aa8.24□□□□□ -1.09
SYNE2-210ENST00000553455 RLBP1P12271 317 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 CDC27P30260 824 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-210ENST00000553455 BAG6P46379 1132 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 GJA8P48165 433 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 RELL1Q8IUW5 271 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 JPH1Q9HDC5 661 aaPredicted RBP8.23□□□□□ -1.09
SYNE2-210ENST00000553455 KCNQ5Q9NR82 932 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 TMEM39AQ9NV64 488 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 TLR6Q9Y2C9 796 aa8.23□□□□□ -1.09
SYNE2-210ENST00000553455 SHISA8B8ZZ34 492 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 OIP5O43482 229 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 GARTP22102 1010 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 AFF1P51825 1210 aaKnown RBP8.22□□□□□ -1.09
SYNE2-210ENST00000553455 PAK2Q13177 524 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 PCNX4Q63HM2 1172 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 TTBK2Q6IQ55 1244 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 EDARADDQ8WWZ3 215 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 INPP5FQ9Y2H2 1132 aa8.22□□□□□ -1.09
SYNE2-210ENST00000553455 MINDY4BA8MYZ0 360 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 H3BRJ5 948 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 EIF4A3P38919 411 aaKnown RBP8.21□□□□□ -1.1
SYNE2-210ENST00000553455 HGSNATQ68CP4 663 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 CACTIN-AS1Q8N1I8 211 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 GALNT6Q8NCL4 622 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 STK35Q8TDR2 534 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 DRC1Q96MC2 740 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 GMLQ99445 158 aa8.21□□□□□ -1.1
SYNE2-210ENST00000553455 M0R082 166 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 SOX1O00570 391 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-210ENST00000553455 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-210ENST00000553455 BMP6P22004 513 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 RPS26P62854 115 aaKnown RBP8.2□□□□□ -1.1
SYNE2-210ENST00000553455 IKBKEQ14164 716 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 SF3A1Q15459 793 aaKnown RBP8.2□□□□□ -1.1
SYNE2-210ENST00000553455 KIAA0825Q8IV33 1275 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 ZNF417Q8TAU3 575 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 BTBD6Q96KE9 485 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-210ENST00000553455 SPON2Q9BUD6 331 aa8.2□□□□□ -1.1
SYNE2-210ENST00000553455 PF4P02776 101 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 BCRP11274 1271 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 NME2P22392 152 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 GMPRP36959 345 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 LMNB2Q03252 620 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 FAM160A1Q05DH4 1040 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 GNL2Q13823 731 aaKnown RBP8.19□□□□□ -1.1
SYNE2-210ENST00000553455 COL9A3Q14050 684 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-210ENST00000553455 FBXL19Q6PCT2 694 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 ILDR2Q71H61 639 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 SULF2Q8IWU5 870 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 RASGRP4Q8TDF6 673 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 GPRASP2Q96D09 838 aa8.19□□□□□ -1.1
SYNE2-210ENST00000553455 EAF1Q96JC9 268 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms