RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 EVCP57679 992 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 MAP3K12Q12852 859 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 NFIXQ14938 502 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 KLHL40Q2TBA0 621 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 PROM2Q8N271 834 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 WWC3Q9ULE0 1092 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 MTMR6Q9Y217 621 aa11.14□□□□□ -0.63
MTHFD1-203ENST00000553391 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 IDH1O75874 414 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 FOXD4L5Q5VV16 416 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 FOXD4L4Q8WXT5 416 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 ZNF274Q96GC6 653 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 BTAF1O14981 1849 aa11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 MYH3P11055 1940 aa11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 AKAP11Q9UKA4 1901 aa11.13□□□□□ -0.63
MTHFD1-203ENST00000553391 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 ZNF213O14771 459 aa11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 MB21D2Q8IYB1 491 aaPredicted RBP11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 SMARCC2Q8TAQ2 1214 aa11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 LLPHQ9BRT6 129 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-203ENST00000553391 BCORQ6W2J9 1755 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 TRIM37O94972 964 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 F13A1P00488 732 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 GYS1P13807 737 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 GYG1P46976 350 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 MAGEB6Q8N7X4 407 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 BRF1Q92994 677 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 LRRC2Q9BYS8 371 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 GZF1Q9H116 711 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 DENND2AQ9ULE3 1009 aa11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-203ENST00000553391 WDR19Q8NEZ3 1342 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 IRS2Q9Y4H2 1338 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 SEMA3EO15041 775 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 PLSCR1O15162 318 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 PHF14O94880 888 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 PDCP20941 246 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 PDIA3P30101 505 aaKnown RBP11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 TXNRD1Q16881 649 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 CAVIN4Q5BKX8 364 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 TMEM87AQ8NBN3 555 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
MTHFD1-203ENST00000553391 PNPLA7Q6ZV29 1317 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 LY75O60449 1722 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 COL4A1P02462 1669 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 KLRG2A4D1S0 409 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 DTNBO60941 627 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 CTDNEP1O95476 244 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 SERPINB2P05120 415 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 GNAT2P19087 354 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 HIBADHP31937 336 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 MCM5P33992 734 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 ANTXR2P58335 489 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 HAND2P61296 217 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 APOBRQ0VD83 1088 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 SCRN1Q12765 414 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 STK3Q13188 491 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 GRAPQ13588 217 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 L1TD1Q5T7N2 865 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 ZNF772Q68DY9 489 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 PRR5LQ6MZQ0 368 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 C15orf52Q6ZUT6 534 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 USP48Q86UV5 1035 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 GRAPLQ8TC17 118 aaPredicted RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 LRP2BPQ9P2M1 347 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 LEMD3Q9Y2U8 911 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 ATP6V1DQ9Y5K8 247 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 ZMYM6O95789 1325 aa11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-203ENST00000553391 CARMIL3Q8ND23 1372 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 IGSF3O75054 1194 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 MBD4O95243 580 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 CYP7A1P22680 504 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 GAS2L3Q86XJ1 694 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 ARMT1Q9H993 441 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 LAMB2P55268 1798 aa11.08□□□□□ -0.64
MTHFD1-203ENST00000553391 PRC1O43663 620 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms