RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 GRM8O00222 908 aa11.9□□□□□ -0.5
CHD8-203ENST00000553283 SOX10P56693 466 aa11.9□□□□□ -0.5
CHD8-203ENST00000553283 MKRN3Q13064 507 aaKnown RBP11.9□□□□□ -0.5
CHD8-203ENST00000553283 SPRYD7Q5W111 196 aa11.9□□□□□ -0.5
CHD8-203ENST00000553283 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
CHD8-203ENST00000553283 C9orf78Q9NZ63 289 aaPredicted RBP11.9□□□□□ -0.5
CHD8-203ENST00000553283 PPP2R3BQ9Y5P8 575 aa11.9□□□□□ -0.5
CHD8-203ENST00000553283 SPEF2Q9C093 1822 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 F8W031 263 aaPredicted RBP11.89□□□□□ -0.51
CHD8-203ENST00000553283 GPR25O00155 361 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 MYO1BO43795 1136 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 PLIN1O60240 522 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 ALDH1L1O75891 902 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 SLC34A2O95436 690 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 MAP3K11Q16584 847 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 CFAP100Q494V2 611 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 TAF7LQ5H9L4 462 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 SLC10A4Q96EP9 437 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
CHD8-203ENST00000553283 PRMT6Q96LA8 375 aaPredicted RBP11.89□□□□□ -0.51
CHD8-203ENST00000553283 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 CNNM1Q9NRU3 951 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 HPS5Q9UPZ3 1129 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 PCDHAC2Q9Y5I4 1007 aa11.89□□□□□ -0.51
CHD8-203ENST00000553283 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
CHD8-203ENST00000553283 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 UNCXA6NJT0 531 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
CHD8-203ENST00000553283 ALDH1A1P00352 501 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 INHBEP58166 350 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 SRCIN1Q9C0H9 1055 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 FZD1Q9UP38 647 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
CHD8-203ENST00000553283 COL1A1P02452 1464 aaPredicted RBP11.88□□□□□ -0.51
CHD8-203ENST00000553283 PDE4DIPQ5VU43 2346 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 CLRN2A0PK11 232 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 MANSC4A6NHS7 340 aaPredicted RBP11.87□□□□□ -0.51
CHD8-203ENST00000553283 FKTNO75072 461 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 SLC4A10Q6U841 1118 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
CHD8-203ENST00000553283 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
CHD8-203ENST00000553283 FAM205AQ6ZU69 1335 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
CHD8-203ENST00000553283 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
CHD8-203ENST00000553283 RBM5P52756 815 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD8-203ENST00000553283 NBPF12Q5TAG4 269 aaPredicted RBP11.86□□□□□ -0.51
CHD8-203ENST00000553283 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 KAZALD1Q96I82 304 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 FAM84BQ96KN1 310 aaPredicted RBP11.86□□□□□ -0.51
CHD8-203ENST00000553283 VEZTQ9HBM0 779 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 AOX1Q06278 1338 aa11.86□□□□□ -0.51
CHD8-203ENST00000553283 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 USP2O75604 605 aaPredicted RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 GYG1P46976 350 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 IREB2P48200 963 aaKnown RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 RASA3Q14644 834 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 MFSD14BQ5SR56 506 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 FBXO46Q6PJ61 603 aaPredicted RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 SUCLG2Q96I99 432 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 WNK4Q96J92 1243 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 PUS3Q9BZE2 481 aaKnown RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
CHD8-203ENST00000553283 SERPINA10Q9UK55 444 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 RIPOR2Q9Y4F9 1068 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 UTYO14607 1347 aa11.85□□□□□ -0.51
CHD8-203ENST00000553283 NBPF7P0C2Y1 421 aaPredicted RBP11.84□□□□□ -0.51
CHD8-203ENST00000553283 ZEB1P37275 1124 aaPredicted RBP11.84□□□□□ -0.51
CHD8-203ENST00000553283 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
CHD8-203ENST00000553283 ZNF70Q9UC06 446 aaPredicted RBP11.84□□□□□ -0.51
CHD8-203ENST00000553283 TTF2Q9UNY4 1162 aaKnown RBP11.84□□□□□ -0.51
CHD8-203ENST00000553283 MROH5Q6ZUA9 1318 aa11.84□□□□□ -0.51
CHD8-203ENST00000553283 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
CHD8-203ENST00000553283 IGF2BP3O00425 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHD8-203ENST00000553283 TNFAIP1Q13829 316 aa11.83□□□□□ -0.52
CHD8-203ENST00000553283 FBXO33Q7Z6M2 555 aa11.83□□□□□ -0.52
CHD8-203ENST00000553283 ANKRD13AQ8IZ07 590 aa11.83□□□□□ -0.52
CHD8-203ENST00000553283 TDRD3Q9H7E2 651 aaKnown RBP11.83□□□□□ -0.52
CHD8-203ENST00000553283 TNRC18O15417 2968 aaPredicted RBP11.82□□□□□ -0.52
CHD8-203ENST00000553283 GJA5P36382 358 aa11.82□□□□□ -0.52
CHD8-203ENST00000553283 RABL6Q3YEC7 729 aaPredicted RBP11.82□□□□□ -0.52
CHD8-203ENST00000553283 OTUD7BQ6GQQ9 843 aa11.82□□□□□ -0.52
CHD8-203ENST00000553283 DZIP1LQ8IYY4 767 aaKnown RBP11.82□□□□□ -0.52
CHD8-203ENST00000553283 MRPL50Q8N5N7 158 aaKnown RBP11.82□□□□□ -0.52
CHD8-203ENST00000553283 BICC1Q9H694 974 aaKnown RBP11.82□□□□□ -0.52
CHD8-203ENST00000553283 ZNF521Q96K83 1311 aa11.82□□□□□ -0.52
CHD8-203ENST00000553283 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
CHD8-203ENST00000553283 CRKP46108 304 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 LRRC24Q50LG9 513 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 VPS37DQ86XT2 251 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 ANKRD44Q8N8A2 993 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 TEPSINQ96N21 525 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 PTPN18Q99952 460 aa11.81□□□□□ -0.52
CHD8-203ENST00000553283 TCP10L2B9ZVM9 353 aa11.8□□□□□ -0.52
CHD8-203ENST00000553283 PDE8BO95263 885 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms