RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.06■■□□□ 1.44
PTCH1-227ENST00000553256 PITPNM2Q9BZ72 1349 aa24.06■■□□□ 1.44
PTCH1-227ENST00000553256 ADM5C9JUS6 153 aa24.05■■□□□ 1.44
PTCH1-227ENST00000553256 SRGAP3O43295 1099 aa24.05■■□□□ 1.44
PTCH1-227ENST00000553256 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
PTCH1-227ENST00000553256 BCAMP50895 628 aa24.05■■□□□ 1.44
PTCH1-227ENST00000553256 SIL1Q9H173 461 aa24.05■■□□□ 1.44
PTCH1-227ENST00000553256 POLA2Q14181 598 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
PTCH1-227ENST00000553256 KRT26Q7Z3Y9 468 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 LPIN2Q92539 896 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 FBXW7Q969H0 707 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 MKRN1Q9UHC7 482 aaKnown RBP24.04■■□□□ 1.44
PTCH1-227ENST00000553256 JAG2Q9Y219 1238 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 TLL2Q9Y6L7 1015 aa24.04■■□□□ 1.44
PTCH1-227ENST00000553256 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
PTCH1-227ENST00000553256 PCDHAC2Q9Y5I4 1007 aa24.03■■□□□ 1.44
PTCH1-227ENST00000553256 COL1A1P02452 1464 aaPredicted RBP24.02■■□□□ 1.44
PTCH1-227ENST00000553256 CELF2O95319 508 aaKnown RBP24.02■■□□□ 1.44
PTCH1-227ENST00000553256 GRIK5Q16478 980 aa24.02■■□□□ 1.44
PTCH1-227ENST00000553256 SAPCD2Q86UD0 394 aa24.02■■□□□ 1.44
PTCH1-227ENST00000553256 OGFOD1Q8N543 542 aa24.02■■□□□ 1.44
PTCH1-227ENST00000553256 AOX1Q06278 1338 aa24.02■■□□□ 1.44
PTCH1-227ENST00000553256 VEGFBP49765 207 aa24.01■■□□□ 1.43
PTCH1-227ENST00000553256 SSH3Q8TE77 659 aa24.01■■□□□ 1.43
PTCH1-227ENST00000553256 DCPSQ96C86 337 aaKnown RBP24.01■■□□□ 1.43
PTCH1-227ENST00000553256 RCAN3Q9UKA8 241 aa24.01■■□□□ 1.43
PTCH1-227ENST00000553256 ARAP2Q8WZ64 1704 aa24.01■■□□□ 1.43
PTCH1-227ENST00000553256 IFIT1P09914 478 aaKnown RBP24■■□□□ 1.43
PTCH1-227ENST00000553256 ATP8B2P98198 1209 aa24■■□□□ 1.43
PTCH1-227ENST00000553256 FTSJ3Q8IY81 847 aaKnown RBP24■■□□□ 1.43
PTCH1-227ENST00000553256 CEP126Q9P2H0 1117 aa24■■□□□ 1.43
PTCH1-227ENST00000553256 DEFB115Q30KQ5 88 aa23.99■■□□□ 1.43
PTCH1-227ENST00000553256 CAVIN4Q5BKX8 364 aa23.99■■□□□ 1.43
PTCH1-227ENST00000553256 MFSD14BQ5SR56 506 aa23.99■■□□□ 1.43
PTCH1-227ENST00000553256 HHIPL1Q96JK4 782 aa23.99■■□□□ 1.43
PTCH1-227ENST00000553256 IQSEC3Q9UPP2 1182 aaPredicted RBP23.99■■□□□ 1.43
PTCH1-227ENST00000553256 THSD7BQ9C0I4 1608 aa23.99■■□□□ 1.43
PTCH1-227ENST00000553256 SLC5A1P13866 664 aa23.98■■□□□ 1.43
PTCH1-227ENST00000553256 ATP2B3Q16720 1220 aa23.98■■□□□ 1.43
PTCH1-227ENST00000553256 ITPRIPQ8IWB1 547 aa23.98■■□□□ 1.43
PTCH1-227ENST00000553256 C1orf115Q9H7X2 142 aa23.98■■□□□ 1.43
PTCH1-227ENST00000553256 HDAC9Q9UKV0 1011 aa23.98■■□□□ 1.43
PTCH1-227ENST00000553256 SCAF8Q9UPN6 1271 aaKnown RBP23.98■■□□□ 1.43
PTCH1-227ENST00000553256 SPDYE2BA6NHP3 402 aa23.97■■□□□ 1.43
PTCH1-227ENST00000553256 SPDYE6P0CI01 402 aa23.97■■□□□ 1.43
PTCH1-227ENST00000553256 SULF1Q8IWU6 871 aa23.97■■□□□ 1.43
PTCH1-227ENST00000553256 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
PTCH1-227ENST00000553256 PRMT6Q96LA8 375 aaPredicted RBP23.97■■□□□ 1.43
PTCH1-227ENST00000553256 ADORA1P30542 326 aa23.96■■□□□ 1.43
PTCH1-227ENST00000553256 TFCP2Q12800 502 aa23.96■■□□□ 1.43
PTCH1-227ENST00000553256 F8W031 263 aaPredicted RBP23.95■■□□□ 1.42
PTCH1-227ENST00000553256 CFAP100Q494V2 611 aa23.95■■□□□ 1.42
PTCH1-227ENST00000553256 SERPINA10Q9UK55 444 aa23.95■■□□□ 1.42
PTCH1-227ENST00000553256 ABT1Q9ULW3 272 aaKnown RBP23.95■■□□□ 1.42
PTCH1-227ENST00000553256 NOP58Q9Y2X3 529 aaKnown RBP23.95■■□□□ 1.42
PTCH1-227ENST00000553256 WDR33Q9C0J8 1336 aaKnown RBP23.94■■□□□ 1.42
PTCH1-227ENST00000553256 PHKA1P46020 1223 aa23.94■■□□□ 1.42
PTCH1-227ENST00000553256 TIMM10P62072 90 aa23.94■■□□□ 1.42
PTCH1-227ENST00000553256 CEP85Q6P2H3 762 aa23.94■■□□□ 1.42
PTCH1-227ENST00000553256 VPS37DQ86XT2 251 aa23.94■■□□□ 1.42
PTCH1-227ENST00000553256 MVPQ14764 893 aaKnown RBP23.93■■□□□ 1.42
PTCH1-227ENST00000553256 DLGAP5Q15398 846 aa23.93■■□□□ 1.42
PTCH1-227ENST00000553256 TBC1D22AQ8WUA7 517 aa23.93■■□□□ 1.42
PTCH1-227ENST00000553256 MRIQ9BWK5 157 aa23.93■■□□□ 1.42
PTCH1-227ENST00000553256 GBA2Q9HCG7 927 aaPredicted RBP23.93■■□□□ 1.42
PTCH1-227ENST00000553256 TTF2Q9UNY4 1162 aaKnown RBP23.93■■□□□ 1.42
PTCH1-227ENST00000553256 HDLBPQ00341 1268 aaKnown RBP23.92■■□□□ 1.42
PTCH1-227ENST00000553256 C20orf194Q5TEA3 1177 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 CCDC102BQ68D86 513 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 CYP4F22Q6NT55 531 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 ZNF408Q9H9D4 720 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 ZBTB40Q9NUA8 1239 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 SUGT1Q9Y2Z0 365 aa23.92■■□□□ 1.42
PTCH1-227ENST00000553256 A0A1B0GUL7 405 aa23.91■■□□□ 1.42
PTCH1-227ENST00000553256 CHAF1AQ13111 956 aaPredicted RBP23.91■■□□□ 1.42
PTCH1-227ENST00000553256 PRAMEF18Q5VWM3 479 aa23.91■■□□□ 1.42
PTCH1-227ENST00000553256 CAPNS2Q96L46 248 aa23.91■■□□□ 1.42
PTCH1-227ENST00000553256 ECM29Q5VYK3 1845 aa23.91■■□□□ 1.42
PTCH1-227ENST00000553256 SALL1Q9NSC2 1324 aa23.9■■□□□ 1.42
PTCH1-227ENST00000553256 MS4A1P11836 297 aa23.9■■□□□ 1.42
PTCH1-227ENST00000553256 XAGE2Q96GT9 111 aa23.9■■□□□ 1.42
PTCH1-227ENST00000553256 PDS5AQ29RF7 1337 aaKnown RBP23.89■■□□□ 1.42
PTCH1-227ENST00000553256 FAM155AB1AL88 458 aaPredicted RBP23.89■■□□□ 1.41
PTCH1-227ENST00000553256 SEMA3EO15041 775 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 CRKP46108 304 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 SPDYE2Q495Y8 402 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 APOBEC3FQ8IUX4 373 aaKnown RBP23.89■■□□□ 1.41
PTCH1-227ENST00000553256 WBP1LQ9NX94 342 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 COG6Q9Y2V7 657 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 SSC5DA1L4H1 1573 aa23.89■■□□□ 1.41
PTCH1-227ENST00000553256 HSPA1AP0DMV8 641 aaKnown RBP23.88■■□□□ 1.41
PTCH1-227ENST00000553256 HSPA1BP0DMV9 641 aaKnown RBP23.88■■□□□ 1.41
PTCH1-227ENST00000553256 HUNKP57058 714 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 RASGRF1Q13972 1273 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 PDE3AQ14432 1141 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 SIRT2Q8IXJ6 389 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 WDR66Q8TBY9 1149 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 GPR108Q9NPR9 543 aa23.88■■□□□ 1.41
PTCH1-227ENST00000553256 AKAP2Q9Y2D5 859 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms