RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 AIDAQ96BJ3 306 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 COL16A1Q07092 1604 aaPredicted RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 M0R2C6 588 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 FGAP02671 866 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 NT5C2P49902 561 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 CCDC102BQ68D86 513 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 SYNE3Q6ZMZ3 975 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 TMTC2Q8N394 836 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 FAM200AQ8TCP9 573 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 WASF1Q92558 559 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 KRT23Q9C075 422 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 NWD2Q9ULI1 1742 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 ZNF831Q5JPB2 1677 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 PRC1O43663 620 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 TOM1O60784 492 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 KDM4AO75164 1064 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 ADORA1P30542 326 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 SIK1P57059 783 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 APOBRQ0VD83 1088 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 STOX1Q6ZVD7 989 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 FERMT3Q86UX7 667 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 RNF214Q8ND24 703 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 CLSTN2Q9H4D0 955 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 RNF41Q9H4P4 317 aaPredicted RBP12.18□□□□□ -0.46
RFX4-210ENST00000552773 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 NUP98P52948 1817 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 LRP5O75197 1615 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 MYH7P12883 1935 aa12.18□□□□□ -0.46
RFX4-210ENST00000552773 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 IDH1O75874 414 aaKnown RBP12.17□□□□□ -0.46
RFX4-210ENST00000552773 APPP05067 770 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 TPM2P07951 284 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 FGFR2P21802 821 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 MCAMP43121 646 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
RFX4-210ENST00000552773 RCAN1P53805 252 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
RFX4-210ENST00000552773 PPP2R5BQ15173 497 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 KCNG4Q8TDN1 519 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 ANGEL1Q9UNK9 670 aaKnown RBP12.17□□□□□ -0.46
RFX4-210ENST00000552773 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 RREB1Q92766 1687 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 SALL1Q9NSC2 1324 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 TCHHQ07283 1943 aa12.17□□□□□ -0.46
RFX4-210ENST00000552773 PATL2C9JE40 543 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 PCP11498 1178 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 TRIM29Q14134 588 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 ZRSR1Q15695 479 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 RBM43Q6ZSC3 357 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 JMYQ8N9B5 988 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 ARAP2Q8WZ64 1704 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 CHAMP1Q96JM3 812 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 C8orf76Q96K31 380 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 FUCA2Q9BTY2 467 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 NYXQ9GZU5 481 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 NAT10Q9H0A0 1025 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 ERICH2A1L162 156 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 JAK2O60674 1132 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 YEATS4O95619 227 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 INTS5Q6P9B9 1019 aaKnown RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 NAP1L5Q96NT1 182 aaPredicted RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 CCDC85AQ96PX6 553 aaPredicted RBP12.16□□□□□ -0.46
RFX4-210ENST00000552773 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 DACT1Q9NYF0 836 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
RFX4-210ENST00000552773 KLF18A0A0U1RQI7 1052 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 A0A1W2PQ27 194 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 A0A1W2PQ64 194 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 A0A1W2PQD8 194 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 SEMA3EO15041 775 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 OFD1O75665 1012 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 HCLS1P14317 486 aaPredicted RBP12.15□□□□□ -0.46
RFX4-210ENST00000552773 PDE6AP16499 860 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 LIFRP42702 1097 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 SF3A1Q15459 793 aaKnown RBP12.15□□□□□ -0.46
RFX4-210ENST00000552773 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
RFX4-210ENST00000552773 NOL10Q9BSC4 688 aaKnown RBP12.15□□□□□ -0.46
RFX4-210ENST00000552773 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
RFX4-210ENST00000552773 NAPBQ9H115 298 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
RFX4-210ENST00000552773 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 NRAPQ86VF7 1730 aa12.15□□□□□ -0.46
RFX4-210ENST00000552773 PNPLA7Q6ZV29 1317 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms