RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 ZNF609O15014 1411 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 KIF7Q2M1P5 1343 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 KIF4BQ2VIQ3 1234 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 SLC9C1Q4G0N8 1177 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 RBM17Q96I25 401 aaKnown RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 CRAMP1Q96RY5 1269 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 ZBTB7BO15156 539 aaPredicted RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 PRR20EP86478 221 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 PRR20CP86479 221 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 PRR20DP86480 221 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 PRR20BP86481 221 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 PRR20AP86496 221 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 DPP8Q6V1X1 898 aaPredicted RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 NBPF11Q86T75 865 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 STAP2Q9UGK3 403 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 SCAF8Q9UPN6 1271 aaKnown RBP11.38□□□□□ -0.59
PRIM1-208ENST00000552590 ATP6V0A2Q9Y487 856 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 NR2E3Q9Y5X4 410 aa11.38□□□□□ -0.59
PRIM1-208ENST00000552590 NCOR1O75376 2440 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 SLC19A1P41440 591 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 NEUROD1Q13562 356 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
PRIM1-208ENST00000552590 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
PRIM1-208ENST00000552590 PRAMEF18Q5VWM3 479 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 PTCH2Q9Y6C5 1203 aa11.37□□□□□ -0.59
PRIM1-208ENST00000552590 HLFQ16534 295 aa11.36□□□□□ -0.59
PRIM1-208ENST00000552590 SHISA4Q96DD7 197 aa11.36□□□□□ -0.59
PRIM1-208ENST00000552590 AMER1Q5JTC6 1135 aaPredicted RBP11.35□□□□□ -0.59
PRIM1-208ENST00000552590 ZNF790Q6PG37 636 aa11.35□□□□□ -0.59
PRIM1-208ENST00000552590 HTATIP2Q9BUP3 242 aa11.35□□□□□ -0.59
PRIM1-208ENST00000552590 SMAPO00193 183 aa11.34□□□□□ -0.59
PRIM1-208ENST00000552590 SCARF1Q14162 830 aa11.34□□□□□ -0.59
PRIM1-208ENST00000552590 SH3TC2Q8TF17 1288 aa11.34□□□□□ -0.59
PRIM1-208ENST00000552590 KCNQ5Q9NR82 932 aa11.34□□□□□ -0.59
PRIM1-208ENST00000552590 BDP1A6H8Y1 2624 aa11.34□□□□□ -0.59
PRIM1-208ENST00000552590 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
PRIM1-208ENST00000552590 WFS1O76024 890 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 RPS12P25398 132 aaKnown RBP11.33□□□□□ -0.6
PRIM1-208ENST00000552590 SP3Q02447 781 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
PRIM1-208ENST00000552590 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 NYXQ9GZU5 481 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 USP16Q9Y5T5 823 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 KDM3BQ7LBC6 1761 aa11.33□□□□□ -0.6
PRIM1-208ENST00000552590 FAM187AA6NFU0 413 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 CRHR2Q13324 411 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 TCIRG1Q13488 830 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 FMNL2Q96PY5 1086 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
PRIM1-208ENST00000552590 EMID1Q96A84 441 aaPredicted RBP11.32□□□□□ -0.6
PRIM1-208ENST00000552590 CDH23Q9H251 3354 aa11.32□□□□□ -0.6
PRIM1-208ENST00000552590 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.32□□□□□ -0.6
PRIM1-208ENST00000552590 RPTORQ8N122 1335 aa11.31□□□□□ -0.6
PRIM1-208ENST00000552590 RTL9Q8NET4 1388 aa11.31□□□□□ -0.6
PRIM1-208ENST00000552590 KCNQ3O43525 872 aa11.31□□□□□ -0.6
PRIM1-208ENST00000552590 PRKG1Q13976 671 aa11.31□□□□□ -0.6
PRIM1-208ENST00000552590 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
PRIM1-208ENST00000552590 ABCC4O15439 1325 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 MANSC4A6NHS7 340 aaPredicted RBP11.3□□□□□ -0.6
PRIM1-208ENST00000552590 INHBEP58166 350 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 COPS2P61201 443 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 INSM1Q01101 510 aaPredicted RBP11.3□□□□□ -0.6
PRIM1-208ENST00000552590 MTFR1Q15390 333 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 SP8Q8IXZ3 490 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 TAF1P21675 1872 aa11.3□□□□□ -0.6
PRIM1-208ENST00000552590 NBPF26B4DH59 902 aa11.29□□□□□ -0.6
PRIM1-208ENST00000552590 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
PRIM1-208ENST00000552590 NBPF10Q6P3W6 841 aaKnown RBP11.29□□□□□ -0.6
PRIM1-208ENST00000552590 GUCD1Q96NT3 240 aa11.29□□□□□ -0.6
PRIM1-208ENST00000552590 WIPF1O43516 503 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 RNF40O75150 1001 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 GPTP24298 496 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 TEFQ10587 303 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 LRIT3Q3SXY7 679 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 DUOX1Q9NRD9 1551 aa11.28□□□□□ -0.6
PRIM1-208ENST00000552590 TMEM265A0A087WTH1 108 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 RNF223E7ERA6 249 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 WASHC4Q2M389 1173 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 SUSD4Q5VX71 490 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 BBXQ8WY36 941 aaPredicted RBP11.27□□□□□ -0.6
PRIM1-208ENST00000552590 CDCA7LQ96GN5 454 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 SNX27Q96L92 541 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 GDF15Q99988 308 aa11.27□□□□□ -0.6
PRIM1-208ENST00000552590 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.61
PRIM1-208ENST00000552590 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
PRIM1-208ENST00000552590 ECE2O60344 883 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 BBOX1O75936 387 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 HMOX1P09601 288 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 BMP8BP34820 402 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 IL13P35225 146 aa11.26□□□□□ -0.61
PRIM1-208ENST00000552590 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms